KEGG   Baudoinia panamericana: BAUCODRAFT_63084
Entry
BAUCODRAFT_63084  CDS       T03106                                 
Name
(RefSeq) hypothetical protein
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
bcom  Baudoinia panamericana
Pathway
bcom03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BAUCODRAFT_63084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcom03019]
    BAUCODRAFT_63084
Enzymes [BR:bcom01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     BAUCODRAFT_63084
Messenger RNA biogenesis [BR:bcom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     BAUCODRAFT_63084
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     BAUCODRAFT_63084
SSDB
Motif
Pfam: Exo_endo_phos LRR_8 LRR_4 LRR_1 LRR_6 Phage_fiber
Other DBs
NCBI-GeneID: 19116045
NCBI-ProteinID: XP_007672595
JGI: Bauco1_63084
UniProt: M2NKW3
Position
Unknown
AA seq 685 aa
MFNHGSHRYNHGVPNGGGMSGLHKTFGSQSHHVTQQQDHGLSNGNFGNHQHTISGSTLTS
TTPHFTPAHLQNGTPEHTNSLSNPPNEHWAEQMAEAKRIESAGDKPHFYARNAPSVARLG
GNGSSSVSIRADLDEHGERRKPVANGDVEEAGAWDAMDLCGHGLKSIGASVFRHYPNLRK
LYFANNKLEVLPLQIGTMRSLTELDLSYNGLRELPPEIGMLTHLKKLLLYGNDLYDLPYE
LGALHQLEVLGLYGNNRLRRDYYDRVKEHGTRELVRYLREQAPAPPAPFERDWIKLVDEV
ENESERFTVCSWNTLCDRAATQAAYGYTPSAALAWDHRRGVILDELTHRKADILTLQEVD
TESYNEYFRPNLATEDYKGMFWAKGRAQTMGDKEAKTVDGCAIFYKNSKYILLDKQVINY
SQEAIRRPDMRGDADVFNRVMPRDHIAVVAFLENRMTGSRLIVVDTHLAWEGWFADVKVV
QVAILLERLANLAKTYAAWPPCKDKELFRYANDDSLEPTPDPAIPRPTPAPSMHYDDATQ
IPMLVCGDFNSTADSGVHDLITLGSLSNSHTDLGTQKYGDFTRNGMTHPFSLKSAYASIA
HWPFTNYTSEFREVIDYIWYSTNTLQVTSLLGEVDPEYMRKVPGFPNWHFPSDHLALMAE
FVVKGRRERKVVEADFGPGRRTSRH
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgtttaaccatggcagtcaccgctacaaccatggcgtgccgaacggcggtggcatgagt
ggcttgcacaagacgtttggctcacagtcccaccacgtgacccaacaacaggatcacggc
ctgagcaatggcaactttggcaatcaccaacacaccatctccggcagcaccctgacgagc
accaccccgcacttcacgcccgcgcatctgcagaatggaacacccgaacacacgaactcg
ctcagtaacccgccgaacgagcattgggccgagcaaatggcggaggcgaagaggatcgag
agtgctggtgacaagccacacttctacgccaggaacgctccgtccgtagcacggttgggc
ggcaatggctcgtcatcagttagcatacgcgcggatctggatgagcacggagagcgtagg
aagcctgtggcgaatggagatgtcgaagaggccggcgcatgggacgcgatggacctctgc
ggtcatggccttaagagcattggcgccagtgtcttcaggcattatccgaacctgcgcaag
ctgtactttgccaacaacaagctggaggtgctcccgttacagattggcacgatgcggtca
ttgaccgagctggacttgtcgtacaatggccttcgagaactgcctccggagatcggtatg
cttacgcatttgaagaagcttcttctctatggaaacgacctttacgatctaccgtacgag
ttgggcgcactacatcaactcgaggtactcgggctttatggcaataatcggctacggcga
gattactacgaccgggtgaaggagcatggcacgcgtgagctcgtgcggtatctacgagag
caggcgcctgcaccaccagcgcccttcgagcgcgactggatcaagctcgtcgatgaggtc
gagaacgagtcggagagatttaccgtctgtagctggaacactctttgcgaccgagcggcc
actcaagctgcgtacggctatacgccttcagctgcactcgcatgggatcaccggcgtggc
gtgattctggacgagctgacgcacagaaaagccgacatactcaccctccaggaagtggac
acagaaagctacaacgagtacttcagacccaatcttgcgaccgaagactacaagggcatg
ttctgggctaaaggcagagcacagacgatgggcgataaggaggccaagaccgtcgatggc
tgtgcgatcttttacaagaactcaaagtacatcctcctcgacaagcaagtcatcaactac
tcgcaggaagccatccgacggccggacatgcgcggtgacgcagacgtcttcaaccgcgtg
atgccacgagatcacatcgccgtggtcgctttcctagagaaccgcatgaccggctcccgc
ctcatcgtcgtcgacacgcatctggcatgggaaggctggttcgccgacgtgaaagtcgtc
caagtcgccatcctactcgaacgcctcgccaacctcgccaaaacctacgccgcctggccc
ccctgcaaagacaaagagctcttccgctacgccaacgacgacagcctcgagcccaccccc
gaccccgccatcccccgtcccacgcccgccccctcaatgcactacgacgacgccacccaa
atccccatgctcgtctgcggcgacttcaacagcaccgccgactccggcgtccacgacctc
atcaccctcggctccctctccaactcccacaccgacctcggcacgcagaaatacggcgac
ttcacccgcaacggcatgacgcacccgttcagcctcaaatccgcctacgctagtatcgcc
cattggcccttcaccaactacacgtccgagttccgcgaggtgattgattatatttggtat
agtacgaataccctgcaggtgacgagtctgttgggcgaggtggatccggagtatatgcgc
aaagtgcccgggtttccgaattggcacttcccgagcgatcatttggcgttgatggcggag
tttgtggtcaaggggcgcagggagcggaaggtggtggaggcggattttgggccggggagg
aggactagtaggcattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (49)   

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