KEGG   Burkholderia contaminans: NL30_05035
Entry
NL30_05035        CDS       T03969                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
bcon  Burkholderia contaminans
Pathway
bcon03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bcon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NL30_05035
  09124 Replication and repair
   03420 Nucleotide excision repair
    NL30_05035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcon03021]
    NL30_05035
   03400 DNA repair and recombination proteins [BR:bcon03400]
    NL30_05035
Enzymes [BR:bcon01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     NL30_05035
Transcription machinery [BR:bcon03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     NL30_05035
DNA repair and recombination proteins [BR:bcon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     NL30_05035
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD GlgS ResIII
Other DBs
NCBI-ProteinID: AKM39295
Position
1:complement(1169451..1171751)
AA seq 766 aa
MSYVVAVRAMCEFTARRGDLDLRFTPAPTALEGIAGHGAVTSNRGARYETEIALTGTWGT
LTVRGRADGYDPVANRLEEIKTYRGSLDAMPANHRALHWAQAKVYAHLMCDARGFQEIDV
ALVYFDIVSERETVLTQTLGAAELATFFAEQCACFVGWAERETAHRAARDAALRALAFPH
GQFRSGQRELAVAVYRAARDERCLMAQAPTGIGKTLGTVFPLLKACGEGELDHVYFLTAK
TPGRALALEAATTLGAGTPALPLRVLELVARDKACEHPDSACHGESCPLAKGFYDRLPAA
RDAAIEAGLLDRETVRAAALAHDVCPYYLSQELARWSDMVIGDYNYYYDGSAMLHTLAQQ
NQWRVGVLVDEAHNLLDRARKMYSASLDPFAFAAAREIAPAALRKAFDRLARAWGSVSRA
QAERYAAYPEIPGPIVSAVQNLVAAIGEHLADAPRANGDALLRFHFEAIQFGVLAEAFDS
ASIFDATLHGEPLPRQPALHGVMSAGRRRRVQSTLCVRNVIPAGFLAPRYEAACATVLFS
GTLSPFHFYRDTLGLPGDTGWLDVDGPFRAEQLTVRVASHVSTRWRDRDRSLEPIADLIA
AQYATRPGNYLGFLSSFDYLGRVVALMQTRHPDVPVWAQAPGMAESERDAFLARFDAGGR
GVGFAVLGGAFSEGVDLVGERLIGAFIATLGLPQVNDVNEQMRRAMDARFGNGYDYMYLY
PGLQKVVQAAGRVIRTEHDEGVVHLIDDRYRRREVRDLLPRWWRIG
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgagctatgtcgtcgcggtgcgggcgatgtgcgagttcaccgcgcgacgcggcgatctc
gacctgcgcttcacgcccgcgccgaccgcgctcgaaggcatcgccggccacggtgcggtc
acgtcgaaccgcggcgcgcgctacgaaaccgaaatcgcgctgacgggcacctggggtacg
ctcaccgtgcgcggccgcgcggacggctacgacccggtggcaaaccgtctcgaggaaatc
aagacctatcgcggcagcctcgacgcaatgccggccaatcaccgtgcgctgcactgggcg
caagcgaaggtctacgcgcatttgatgtgcgacgcgcgcggcttccaggaaatcgacgtc
gcgctggtctatttcgacatcgtgtccgagcgcgagacggtgctgacgcaaacgctgggg
gcggccgaactcgcgacgttcttcgccgaacagtgcgcgtgtttcgtcggctgggccgag
cgcgagacggcgcatcgcgctgcacgcgatgcggcgctgcgcgcgctggcgtttccgcac
ggccagttccgcagcggccagcgcgagctggcggtggccgtctatcgcgcggcacgcgac
gagcgttgcctgatggcgcaggcgccgaccggcatcggcaagacactcggcaccgtgttt
ccgttgctgaaggcctgcggcgagggcgagctcgatcacgtgtacttcctgaccgcgaaa
acgcccggacgcgcgctcgcgctcgaggctgcgacgacgctcggcgccggcacgccggcg
ctgccgctgcgcgtgctggagctcgtcgcgcgcgacaaggcgtgcgagcatccggacagc
gcatgccacggcgaatcgtgtccgctcgcgaaaggtttttacgaccggctgccggccgcg
cgcgatgcggcaatcgaggcggggctgctcgatcgcgagaccgtgcgcgcggccgcgctc
gcgcacgacgtctgcccgtactacctgtcgcaagagcttgcgcgctggtccgacatggtg
atcggcgactacaactactactacgacggcagcgcgatgctgcatacgctcgcgcagcag
aaccagtggcgtgtcggcgtgctcgtcgacgaagcgcacaacctgctcgatcgcgcgagg
aagatgtacagcgcgtcgctcgatccgttcgcattcgcggcggcccgcgagatcgcgccc
gcggcgctgcgcaaggcgttcgaccggctcgcccgcgcctggggctcggtcagtcgcgcg
caggccgagcgctatgccgcgtatccggagattccgggcccgatcgtgtcggccgtgcag
aacctcgtcgcggcaatcggcgaacacctggccgacgcgccgcgcgcgaacggcgatgcg
ctgctgcggtttcatttcgaggcgatccagttcggcgtgctggccgaagcgttcgacagc
gcatcgatcttcgacgcgacgctgcacggcgaaccgttgccgcgccagccggcgctgcac
ggcgtgatgtcggccggccgccggcgccgcgtccagtcgacgctgtgcgtgcgcaacgtg
attccggccggctttctcgcgccgcgctacgaagccgcgtgcgcgaccgtgctgttctcg
ggcacgctgagcccgtttcatttctatcgcgacacgctcgggttgcccggcgacacgggc
tggctcgacgtcgacgggccgttccgcgccgaacaactgacggtgcgcgtcgcgagccac
gtgtcgacgcgctggcgcgaccgcgaccgttcgctcgaaccgatcgccgacctgatcgcc
gcgcaatacgcgacgcggcccggcaactacctcggcttcctgagcagcttcgactacctg
gggcgcgtggtcgcgctgatgcaaacgcggcacccggacgtgcccgtctgggcgcaggcg
cccggcatggcggaaagcgagcgagacgcctttctcgcacgcttcgatgcaggcgggcgc
ggcgtcggcttcgcggtgctgggcggggcgttctcggaaggcgtggacctcgttggcgag
cggctgatcggcgcgttcatcgcgacgctcgggctgccgcaggtcaacgacgtcaacgag
cagatgcggcgcgcgatggacgcgcgcttcggcaacggctacgactacatgtacctgtat
ccgggcttgcagaaggtcgtgcaggcggccgggcgcgtgatccgcaccgagcacgacgaa
ggcgtcgtgcacctgatcgacgaccgttaccgccggcgcgaagtgcgcgatctgctgccg
cggtggtggcggatcgggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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