KEGG   Beutenbergia cavernae: Bcav_0846
Entry
Bcav_0846         CDS       T00893                                 
Name
(GenBank) type III restriction protein res subunit
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
bcv  Beutenbergia cavernae
Pathway
bcv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bcv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Bcav_0846
  09124 Replication and repair
   03420 Nucleotide excision repair
    Bcav_0846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcv03021]
    Bcav_0846
   03400 DNA repair and recombination proteins [BR:bcv03400]
    Bcav_0846
Enzymes [BR:bcv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Bcav_0846
Transcription machinery [BR:bcv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Bcav_0846
DNA repair and recombination proteins [BR:bcv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Bcav_0846
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom AAA_22 AAA_16
Other DBs
NCBI-ProteinID: ACQ79107
UniProt: C5BZD5
Position
complement(943122..944768)
AA seq 548 aa
MPSGPLIVQSDKTLLLEIDHDQAQACRRAIAPFAELERAPEHVHTYRLTPLGLWNARAAG
HDAEQVVDTLLAYSRYPVPHALLVDVAETMSRYGRLQLVNDPAHGLVLRALEVPVLEEVL
RSKRTAGLVGARLDPENVVVHPSERGHLKQVLLKLGWPAEDLAGYVDGEAHAIELAEDGW
ALRPYQSEAVESFWHGGSGVVVLPCGAGKTLVGAAAMAQSQTTTLILVTNTVSARQWRDE
LLRRTSLTEDEIGEYSGSRKEVRPVTIATYQVLTTRRKGVYTHLELLDARDWGLVVYDEV
HLLPAPIFRMTADLQARRRLGLTATLVREDGREDEVFSLIGPKRYDAPWKDIEAQGYIAP
ADCVEIRLTLPDSARMAYATAEPEDRYRLAATAAGKSRVVRELLRKHDGEQTLVIGQYLD
QLEELGEQIGAPVITGATTVPERQRLFDAFRSGDVTTLVVSKVANFSIDLPEAAVAIQVS
GSFGSRQEEAQRLGRLLRPKGDGRTAHFYAVVARDTVDQDFAAHRQRFLAEQGYAYRIID
AEDLAADV
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgccgtcaggccccctgatcgtccagtccgacaagaccctcctcctcgagatcgaccac
gaccaggcccaggcctgccgtcgcgcgatcgcgccgttcgccgagctcgagcgcgccccg
gagcacgtccacacgtaccgcctcaccccgctcggcctgtggaacgcgcgcgccgccggg
cacgacgccgagcaggtcgtcgacacgttgctcgcctacagccggtacccggtcccgcac
gccctgctcgtcgacgtcgccgagacgatgtcgcgctacggccgcctccagctcgtcaac
gacccggcgcacgggctggtgctgcgtgcgctcgaggtgccggtgctcgaggaggtgctg
cgttccaagcggaccgccggactggtcggtgcgcgcctcgacccggagaacgtcgtcgtc
caccccagtgaacgcggtcacctcaagcaggtgctgctcaagctcggctggccggcggag
gacctcgcggggtacgtcgacggcgaggcccacgcgatcgagctcgcggaggacggctgg
gcgctgcggccgtaccagagcgaggcggtggagtcgttctggcacggcgggagcggcgtc
gtcgtcctcccctgcggtgcggggaagacgctcgtgggcgcggcggccatggcccagtcg
cagacgacgacgctcatcctcgtgacgaacaccgtgagcgcccgtcagtggcgggacgag
ctgctgcgccgcacctcgctcaccgaggacgagatcggcgagtactccggctcccgcaag
gaggtccggccggtgacgatcgccacgtaccaggtgctcaccacccggcggaagggtgtg
tacacccacctcgagctgctcgacgcgcgggactgggggctcgtggtctacgacgaggtc
cacctgctgccggcgcccatcttccgcatgaccgccgacctgcaggcacgccgtcggctc
ggtctcacggccacgctcgtgcgcgaggacggccgcgaggacgaggtgttcagcctcatc
gggccgaagcggtacgacgcaccgtggaaggacatcgaggcccagggctacatcgcaccg
gcggattgcgtggagatccggctgacgctgccggactcggcacggatggcgtacgcgacg
gcggagcccgaggaccggtaccggctcgccgccacggcggccgggaagtcgcgggtggtg
cgcgagctgctgcgcaagcacgacggcgagcagacgctcgtgatcgggcagtacctcgac
cagctcgaggagctcggcgagcagatcggggcgccggtgatcaccggggcgacgacggtg
cccgagcgccagcgcctgttcgacgcgttccgcagcggtgacgtgacgacgctggtcgtg
agcaaggtggcgaacttctcgatcgacctgcccgaggctgcggtagcgatccaggtctcc
gggtcgttcggctcgcggcaggaggaggcgcagcgcctcggccgcctgctccgcccgaag
ggcgacgggcggacggcgcacttctacgccgtcgtcgcccgcgacacggtcgaccaggac
ttcgccgcgcaccggcagcgcttcctcgccgagcagggatacgcctaccggatcatcgac
gccgaggacctcgccgccgacgtgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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