KEGG   Bacillus cytotoxicus: Bcer98_3272
Entry
Bcer98_3272       CDS       T00560                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bcy  Bacillus cytotoxicus
Pathway
bcy03030  DNA replication
bcy03410  Base excision repair
bcy03420  Nucleotide excision repair
bcy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bcy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Bcer98_3272
   03410 Base excision repair
    Bcer98_3272
   03420 Nucleotide excision repair
    Bcer98_3272
   03440 Homologous recombination
    Bcer98_3272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcy03032]
    Bcer98_3272
   03400 DNA repair and recombination proteins [BR:bcy03400]
    Bcer98_3272
Enzymes [BR:bcy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Bcer98_3272
DNA replication proteins [BR:bcy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Bcer98_3272
DNA repair and recombination proteins [BR:bcy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Bcer98_3272
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Bcer98_3272
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 HHH_2 DNA_pol_P_Exo Taq-exonuc MIER1_3_C HHH
Other DBs
NCBI-ProteinID: ABS23491
UniProt: A7GTN3
Position
complement(3338003..3340636)
AA seq 877 aa
MEKKVVLVDGNNIAYRAFFALPLLNNDKGIHTNAIYGFTMMLMRILEEEKPTHMLVAFDA
GKTTFRHKTFSDYKGGRQKTPPELSEQFPFIRELLDAFRVPRYELEDYEADDIMGTLAKE
ASEQGAQVKVISGDKDLLQLVSDHTRVCIPRKGITEVDEYTKEALFEKYNLSPKQIIDMK
GLMGDQSDNIPGVPGVGEKTAIKLLTQFGTVEAVYENLDQVSGKKLKEKLETHKEQAFMS
KELATIITDAPITVHIDDIEYKGYEAGDIIPLFENLGFTSLLNKLGAPSEEAVSAELDDI
SFEIAEEVTEEMLQQDSAIIVEVQEENYHKADIQGFGIQNDNGCYFIPTDIALASEAFIK
WLKDEEMRKYTFDAKRAIVALKWKGVEIRGVDFDLLIAAYLLDPADTDKDFRTVAKMKET
HAVKSDEEVYGKGAKRAVPAQEIVAEHVARKVHVLYDVKQTFIDELEKNEQYELFINLEM
PLACVLADMEVKGVKVDTERLRNMGDELAGRLKEMEQEIYELAGTEFNINSPKQLGVVLF
EKLNLPVIKKTKTGYSTSADVLDKLMDHHEIIPKILHYRQLGKLNSTYIEGLLKVVHDES
SKIHTRFNQVLTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFIPSQEGWVMYAADYSQIEL
RVLAHIAKDKGLIEAFQHDMDIHTKTAMDVFGVEKDEVTANMRRQAKAVNFGIVYGISDY
GLSQNLGITRKAAGEFIEKYFASFPGVKEYMDEIVQEAKQKGYVSTLLNRRRYIPEITSR
NFNVRSFAERTAMNTPIQGSAADIIKKAMIVMADRLEEEGLQARLLLQVHDELIFEVPKE
EIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTWYDAK
NT seq 2634 nt   +upstreamnt  +downstreamnt
ttggaaaaaaaagttgtattagttgatggaaataatatcgcatatcgtgcttttttcgca
ctaccgcttttaaataacgataaggggatacatacgaacgcaatttatggttttacaatg
atgcttatgaggatattggaagaagaaaagcctacgcatatgcttgtggcatttgatgct
gggaagacaacattccgccataagacatttagtgactataaggggggacgtcaaaaaacg
ccacctgaactttcagagcaattccccttcattcgcgaattgttagatgcttttcgtgta
cctcgttatgaattagaagactacgaggctgatgatattatggggacgttagcgaaagaa
gcaagtgaacaaggggcacaggtaaaagtaatttccggagataaagatttacttcaactc
gtttctgatcatacacgtgtatgtattccgcgtaaaggaattacagaagtggacgagtat
acaaaagaggcactctttgaaaagtataacttatcaccaaaacaaattattgatatgaaa
gggctaatgggggaccaatcggataacattcctggcgttccaggtgttggagagaaaacg
gcgattaaactgttaacgcaatttgggacagtggaagctgtatatgaaaatctagatcaa
gtgagcggtaagaagttaaaagaaaaattagagacacataaagagcaagcatttatgagt
aaagaacttgcgacaattattacggatgcacctattactgtgcatatagatgatattgaa
tataaaggatatgaggcaggcgacattattcctctttttgaaaatctaggttttacgtct
ttattaaataagcttggggctccttctgaagaagctgtttcagctgaattagatgatatt
tcatttgaaattgctgaagaagtaacagaagagatgctgcagcaagatagtgcaatcatt
gtagaagtgcaagaagagaattatcataaagcagacattcaaggatttggtattcaaaat
gacaatggctgttatttcatcccaacggatatagctcttgcgtctgaggcgttcataaaa
tggctgaaggatgaagaaatgagaaagtatacatttgatgctaaacgtgccattgtagca
cttaaatggaaaggcgtagaaattagaggggttgattttgatttattaatcgctgcgtat
ttacttgacccagctgatacagacaaagatttccgtacggtagcaaaaatgaaagaaaca
catgcggtgaaatcggatgaagaagtgtatggtaagggagcaaaacgtgctgttccggcg
caggaaattgttgcagaacacgtagcgcgcaaagtacatgtcttatatgatgtaaaacaa
acatttatagatgaattagagaaaaatgaacaatatgaactgttcataaaccttgaaatg
ccgctagcgtgcgtcttagctgacatggaagtaaaaggtgtgaaagttgatacagagcgc
ttgcgtaatatgggagatgaacttgctggtagactaaaggaaatggagcaagaaatttat
gagcttgctggtacagaatttaatattaattcgccaaagcagctcggtgttgttctattt
gagaagctgaatttaccagtgattaaaaagacgaagacaggatattctacatcagctgat
gtactagataagttgatggatcatcatgaaattattccaaagattttacattatcgtcaa
cttggcaaattgaactcaacgtatattgaaggtctactaaaagttgttcatgatgagtca
tctaaaattcatactcgttttaatcaagtattaacacaaacggggcgcttaagttctaca
gaaccgaatttacaaaatatcccgattcgtttagaggagggaagaaagattcgccaggct
tttattccttcacaagaaggatgggttatgtatgcggctgattattcacaaatcgaatta
cgtgtactggcacatattgcaaaagataaaggattaatagaagcatttcagcatgatatg
gatattcatacaaagacagcaatggatgtctttggtgttgaaaaagatgaagtaacagca
aatatgagacgacaagcaaaagcagtaaactttgggattgtgtacggcattagcgattac
ggactttcacaaaacttaggaattacacgaaaagcagcaggagaatttatcgagaagtat
tttgctagcttccctggtgtaaaagagtatatggatgaaattgtccaagaagcgaaacaa
aagggatatgtttctactttattaaatcgtcgtcgttatattccagaaattacaagtcgg
aattttaatgtgcgtagttttgctgagcgtacagcaatgaatacaccaattcaaggcagt
gccgctgatattattaaaaaagcaatgatcgttatggcagatcgtttagaagaagaagga
ctacaagcgcgtcttcttttacaagtacacgatgaattaatctttgaagtgccaaaagag
gaaatagaaaaacttgaaaagcttgtcccagaagtaatggaacatgcgattgaacttgct
gttccgctaaaggttgattattcatacgggccaacttggtatgatgcaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (23)   

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