KEGG   Bdellovibrio sp. NC01: DOE51_11135
Entry
DOE51_11135       CDS       T06360                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bdc  Bdellovibrio sp. NC01
Pathway
bdc03410  Base excision repair
bdc03430  Mismatch repair
bdc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bdc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DOE51_11135 (recJ)
   03430 Mismatch repair
    DOE51_11135 (recJ)
   03440 Homologous recombination
    DOE51_11135 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bdc03400]
    DOE51_11135 (recJ)
DNA repair and recombination proteins [BR:bdc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     DOE51_11135 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     DOE51_11135 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DOE51_11135 (recJ)
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1
Other DBs
NCBI-ProteinID: QDK38102
UniProt: A0A514WX65
Position
complement(2299646..2301376)
AA seq 576 aa
MNPLWKLRESETEVATPPPVEGQQWPTLISKLLAARGFTEAQQVDKLLFPKLADLKDPLA
LKGMSQALERLGQAYLNGEKICIYADFDLDGTSGLALLKTGMLALGFPHVLHYQPKRLSE
GYGFHAHAVEELKAQGVSLIITVDVGITAHAAVDRAQELGVDVILTDHHLPTETIPNAFV
VVNPNQGTCESGLGYLCGAGVAFYLLRGLKRYFQDNPQLPKNNWDLKEVLDYFTIGTLTD
MVPLVDDNRVLVKHGLVKLAETKRAGLRALLEELDLTGRPLTSQDVAIRFAPKLNALSRM
ESGILPIDIFLLEDPANARDMVRQVMKNNSTRVQLQSDAETEAQELLKEWPHKDFVFVAS
KNFHRGVVGLIATKLTQVYNKPAFVGSLGDDGMIVGSARLPQGQEACLVEAMGSAAELMS
RFGGHSAAAGFEIAETKVPSLVERLSSHFSDLREKPKPLEIYYDIEAKLPEVSSGLMKWY
DFVGPFGAGFSIPLIHFSRVEVLSKRELKGGHLRLKLADPETHTSMEALLFTPTPRQVET
LQSVPGFYDILGELQWNYFAGQKSIQILIRDLKAAT
NT seq 1731 nt   +upstreamnt  +downstreamnt
gtgaatccgttatggaaattgcgagaaagtgagacggaggtggcaacgcctccaccagtg
gaaggtcagcagtggccgacactgattagcaagcttctcgcagctcgcggattcactgag
gctcaacaagttgacaagcttttgtttcctaagctcgctgatttgaaagatcctcttgct
ttaaaggggatgtctcaagctcttgagcgtctaggccaggcctatttaaatggcgaaaaa
atctgcatctatgctgacttcgacctggatggaacttcaggtctagctcttttaaaaacg
ggcatgttggctttaggtttcccacacgttctacattatcaaccgaagcgtctgtctgaa
ggttacggctttcacgcacacgcagtggaagagttgaaagcccaaggtgtaagtttgatc
atcaccgttgacgtgggtattactgctcacgcggcagttgatcgcgcccaggagttgggt
gttgatgtgattttaacggatcaccatttgcctacagaaactattcccaatgcctttgtc
gttgtgaacccgaatcagggaacttgcgaaagtggtttaggttatttgtgcggggcgggc
gttgcgttttacttgctccgtggcttgaaaagatactttcaagacaacccacaactgcct
aaaaacaattgggatttgaaagaagtgctcgactacttcacgatcggcactttgaccgat
atggtaccgctagttgacgacaatcgtgtgttagtgaaacacggattggtgaagcttgct
gaaactaaaagagcaggacttcgagctttacttgaagagttggatttaaccggtcgtcct
ttaacaagccaagatgttgcgattcgttttgcgccaaagttgaatgctttgtcgcgtatg
gaatcaggtatcttgccaattgatattttccttttagaagatcctgcaaatgcgcgagat
atggttcgtcaggtcatgaagaacaattccactcgtgtgcaattgcaaagtgatgcggaa
acagaagctcaagaactacttaaagagtggcctcataaagactttgttttcgttgcttct
aaaaatttccatcgcggtgttgtaggtttgatcgcaacgaagttgactcaagtttacaac
aaaccggcgttcgtgggctcattgggtgatgacggcatgatcgtcggcagtgcccgactt
ccgcaaggacaggaagcctgtcttgttgaagcgatgggttcagcggcagaattgatgagc
cgttttggtggtcactcggcggcggcgggttttgaaattgcggaaacgaaagtgccaagt
ctagttgaaagactgtcttcgcatttttctgatttgcgcgaaaaaccaaagcctttggaa
atttactacgacatcgaagcaaaactgccagaagtcagttcgggcttgatgaagtggtac
gatttcgtggggccttttggtgcgggattctcgatcccgttgattcatttttctagagtc
gaagttttatcgaaacgcgaactgaaaggcgggcatcttcgtttgaagttggctgatcct
gaaacgcacacttcgatggaagctttgctctttactccgacacctcgacaagtggagact
ctgcagtcagttcctggattctatgatatcttgggcgagcttcagtggaattacttcgct
ggtcagaaatctatccaaattcttattcgtgatctaaaggctgcgacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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