KEGG T01143: BDP

Bifidobacterium dentium Bd1: BDP_0056

Entry

BDP_0056          CDS       T01143

Name

(GenBank) queuine tRNA-ribosyltransferase

K00773

queuine tRNA-ribosyltransferase [EC:2.4.2.29]

Organism

bde Bifidobacterium dentium Bd1

Brite

KEGG Orthology (KO) [BR:bde00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bde03016]
    BDP_0056
Enzymes [BR:bde01000]
2. Transferases
  2.4  Glycosyltransferases
   2.4.2  Pentosyltransferases
    2.4.2.29  tRNA-guanosine34 preQ1 transglycosylase
     BDP_0056
Transfer RNA biogenesis [BR:bde03016]
Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    BDP_0056

SSDB

Motif

Pfam:

TGT

Other DBs

NCBI-ProteinID:

ADB08748

UniProt:

D2Q702

Position

complement(64754..66070)

AA seq 438 aa
MTSLTESNLVEHPRGAEPGKPGDRRAFSFEQITRLPDTADGKGRGGARYGRTGIIHTPHG
DIHTPAFVPVATQAAMKAVLPETMKDLGAQCLLSNAFHLYERPGEQVLDEAGGLAKFMNW
NGPTFTDSGGFQVLSLGAGFKKTLAMDVTGMKSDEVIAEGKERLAFVDEDGVTFKSPLNG
SLHRFSAEISMGIQHKIGADIMFAFDELTTLMNTRGYQERSVERTYRWAQRCVAEHQRLT
EERLGKPYQALYGVVQGANYEDLRRHAAEQIASLDFDGVGIGGAIEKRIIGDTCAWICDA
MPESRPRHVLGIAAVDDIFACVENGGDTFDCVAPARCGRNGAIFTRSGRYNIKRAQFKHD
FGPLEEGCTCYTCTHYSRAYVDHALRAREFNGFTLATIHNEHFFVKLLDDIRASIDGGYF
DEFRDETLARFYANGSRG

NT seq 1317 nt +upstreamnt +downstreamnt
atgacaagccttactgaatcgaatctcgtcgagcatccgcgcggagccgagccgggcaaa
cccggagaccgccgcgcattctcctttgagcaaatcactcgactgccggatacggccgac
ggcaaaggccgcggcggcgcgcgttatggacgtaccggcatcatccacaccccgcatgga
gacatccatacgccggcgttcgtgccggtagccacgcaggccgcgatgaaggccgtattg
ccggagaccatgaaggatctcggcgcgcagtgcctgctgtcaaacgccttccatctctac
gagcggccaggtgagcaagtgctcgatgaggccggcggactcgcgaaattcatgaactgg
aacggtccgaccttcaccgattccggcgggttccaagtgctgtcgctcggtgcgggcttc
aagaagaccctcgccatggacgtaaccggcatgaaatccgatgaagtgatcgccgaaggc
aaggaacgcctcgcattcgtagacgaggatggtgtgacgttcaagtcaccgctcaacggc
tctctgcaccgcttctccgccgagatctccatgggcatccagcacaaaatcggcgccgac
atcatgttcgccttcgacgaactgaccacgttgatgaacacgcgtggctaccaggagcgt
tccgtggagcgtacctatcgttgggcgcagcggtgcgtagccgagcatcagcggcttacc
gaggagcgtctcggcaagccatatcaggcgctgtatggcgtggtacagggcgcgaattat
gaggatctgcgccgtcatgcggccgagcagatcgcctcgcttgatttcgatggcgtcggt
atcggcggcgcgatcgaaaagcgtattatcggcgacacctgcgcctggatctgcgatgcg
atgcccgaaagccgaccgcgccatgtgctcggcatcgccgccgtcgatgacatcttcgcg
tgcgttgagaatggcggcgacacgttcgattgcgtggcgccggcacgttgcggccgcaat
ggcgcgattttcacgcgttcgggccgctataacatcaaacgggcgcagttcaaacacgat
ttcgggccgcttgaggagggctgcacctgctatacctgcacgcactattcgcgtgcctac
gtggatcatgccctgcgtgcccgcgaattcaacggattcacgctggctacaattcacaac
gagcatttcttcgtcaagttgcttgacgacatccgcgcttcgattgatggcggctatttc
gacgaattccgcgacgagacgctggcccgcttctacgcgaacggatcgaggggctaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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