KEGG   Bifidobacterium dentium Bd1: BDP_0626
Entry
BDP_0626          CDS       T01143                                 
Symbol
orn
Name
(GenBank) orn Oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
bde  Bifidobacterium dentium Bd1
Brite
KEGG Orthology (KO) [BR:bde00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bde03019]
    BDP_0626 (orn)
   03009 Ribosome biogenesis [BR:bde03009]
    BDP_0626 (orn)
Messenger RNA biogenesis [BR:bde03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BDP_0626 (orn)
Ribosome biogenesis [BR:bde03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    BDP_0626 (orn)
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: ADB09292
UniProt: D2Q906
Position
723976..724629
AA seq 217 aa
MVDAHDGETYTAEGSRLIWIDCEMTGLDIFGGDELVEVSVVPTDFDLNVLDEGVDFVIKP
SQKAVDHMNDFVRNMHTRSGLIKEWEHGLSLDEAQAKVVEYVKRFTPDGVKPLLAGNTIG
SDKKFLDHYMPELMEHLHYRTIDVSTFKELARRWYPAVYLNRPPKNGGHRALADIIESLD
ELRYYRKAFMAPTPGPDEAEAKAIADDIKATSLIGEN
NT seq 654 nt   +upstreamnt  +downstreamnt
atggtagatgcgcatgacggcgaaacatacaccgctgaaggctcgcgtctgatctggatc
gactgcgagatgaccggcttggatatcttcggcggcgacgaactcgtcgaagtgtccgta
gtgccgaccgacttcgatctgaacgtgcttgacgagggcgtcgatttcgtgatcaagccc
agccagaaggccgtggatcatatgaacgacttcgtgcgcaacatgcatacccgctccggc
ctgatcaaggagtgggaacacggcctttctctcgacgaggcgcaagccaaggtcgtcgaa
tacgtcaagcgattcacgccggacggcgtcaagccattgctggccggcaacaccatcggc
tccgacaagaagttcctcgaccactacatgccggaactcatggagcacctgcattaccgc
accatcgacgtaagcacgttcaaggaacttgcccgtcgctggtatccggccgtctacctc
aaccgtcctccgaagaacggcggtcaccgcgcgctcgccgacatcattgagtccctggat
gaactgcgttactaccgcaaggcgttcatggcgccgacgccgggaccggatgaggccgag
gccaaggccatcgccgacgatatcaaggccaccagtctgatcggcgagaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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