KEGG   Bifidobacterium dentium Bd1: BDP_1862Help
Entry
BDP_1862          CDS       T01143                                 

Gene name
rmlB
Definition
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
bde  Bifidobacterium dentium Bd1
Pathway
bde00521  Streptomycin biosynthesis
bde00523  Polyketide sugar unit biosynthesis
bde00525  Acarbose and validamycin biosynthesis
bde01130  Biosynthesis of antibiotics
Brite
KEGG Orthology (KO) [BR:bde00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    BDP_1862 (rmlB)
   01055 Biosynthesis of vancomycin group antibiotics
    BDP_1862 (rmlB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    BDP_1862 (rmlB)
   00525 Acarbose and validamycin biosynthesis
    BDP_1862 (rmlB)
Enzymes [BR:bde01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     BDP_1862 (rmlB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD NAD_binding_4 RmlD_sub_bind Polysacc_synt_2 NAD_binding_10 NmrA Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID: ADB10444
UniProt: D2Q679
Position
complement(2124630..2125616)
Genome map
AA seq 328 aa AA seqDB search
MTGGCGFIGSNFVHYVVNNHPDVHVTVLDKLTYAGNPENIAGLPEDRVELVVGDICDADL
LDRIVPGHDAIVHYAAESHNDNSIADPEPFLHTNVEGTFRLLEAVRKYGIRYHHVSTDEV
YGDLALDDPAKFTESTPYHPSSPYSSTKAASDLLVRAWTRTYGLRTTISNCSNNYGPYQH
VEKFIPRQITNILEGIRPKLYGKGENVRDWIHTEDHSSGVWTILTKGRIGETYLIGANGE
KNNITVLRMILKMMGQSEDAFDWVKDRPGHDRRYAIDSTKLQTELGWTPTHTDFESGLKQ
TIDWYTENRQWWEKTKAATEARYKAQGQ
NT seq 987 nt NT seq  +upstreamnt  +downstreamnt
gtgaccggtggctgcggcttcatcggatcgaacttcgtacattacgtggtcaataatcat
ccggatgtgcatgtcaccgtattggacaagctgacgtatgcaggcaatcctgagaacatc
gccggacttccggaagaccgcgtggagctggtcgtaggagatatctgcgatgcggatctg
ctggatcgcatcgtgccggggcacgacgcaatcgtgcattatgcggcggaatcgcacaac
gacaactccatcgccgatcccgagccgttcctgcacaccaatgtggagggcacgttccgt
ctgctcgaagcagtacgtaagtatggcatccgctaccatcacgtgagcaccgacgaggtg
tacggcgatctggcgctggatgatccggcgaagttcaccgagtccaccccataccatccg
agttcgccgtattcgtcgacgaaggcggcatccgacctgctggtgcgtgcatggactcgc
acgtacggactgcgcacgaccatttcgaactgctcgaacaactatggtccataccagcat
gttgagaagttcattccgcgtcagattacgaacattttggaaggcattcgcccgaagctg
tacggcaagggtgagaacgtgcgcgactggatccacaccgaagaccattcctccggcgtg
tggacgattctgaccaagggccgtattggcgaaacgtatctgatcggtgcgaacggcgaa
aagaacaacatcaccgtgttgcgcatgatcctgaagatgatggggcagagtgaggatgcg
ttcgattgggtgaaggaccgcccgggccacgaccgtcgttatgcgatcgattcgacgaag
ctgcagacggagttgggttggaccccgacccacacggattttgaatcgggactcaaacag
acgatcgattggtacaccgaaaaccgccagtggtgggagaagaccaaggccgcgaccgaa
gcgcgctacaaggcccaaggtcagtga

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