KEGG   Brachypodium distachyon (stiff brome): 100825903
Entry
100825903         CDS       T01717                                 
Name
(RefSeq) transcription initiation factor IIB-like
  KO
K03124  transcription initiation factor TFIIB
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100825903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bdi03021]
    100825903
Transcription machinery [BR:bdi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     100825903
 Prokaryotic type
  Archaeal type
    TFB
     100825903
SSDB
Motif
Pfam: TFIIB Fe_dep_repress Cyclin_N LacI
Other DBs
NCBI-GeneID: 100825903
NCBI-ProteinID: XP_003565965
Position
2:complement(15786769..15787485)
AA seq 238 aa
MARRRGSVGSRVKGFDPISEMAGRLGVEAPVKERAKEIFREVEDAKAWPRGPPLLGDRSK
VTLYAAACLYVACRNACSPRTLKELAAAACPSAAAGAAISRVEIAKMAMGIRMRLRDEGP
GQAPGVGVLSASSYLRRFGARLGLGERGMAAAEEAARRLEQSGLDVRHNAESVASGIIYM
AAEGAGFCVTYKGVAAAVGVTGATVSAVCRKLRPHAQMLFGYSVPATIAACCVRPLRV
NT seq 717 nt   +upstreamnt  +downstreamnt
atggcgcgccgccgcggcagcgtcgggtcgcgggtgaaggggttcgacccgatctccgag
atggcgggccggctcggggtcgaggcgcccgtcaaggagcgggccaaggagatcttccgg
gaggtggaggatgcaaaggcatggccgcgcggcccgcccttgctcggggaccggagcaag
gtcacgctctacgcggccgcctgcctctacgtcgcctgccgcaacgcgtgctcgccgcgc
acgctcaaggagctggccgcggcggcgtgcccctccgccgcggcgggcgcggccatttcg
agggtggagatcgccaagatggcgatgggcatcaggatgcggctcagggacgaaggcccg
gggcaggcgccgggcgtcggcgtgctgagcgcgtcgagctacctccgccgcttcggggcg
cggctggggttgggggagcgtgggatggcggcggcggaggaggcggcgagaaggctggag
cagagcggcctcgacgtgcgccacaacgccgagtccgtcgcctccgggatcatctacatg
gcggcggagggcgccgggttctgcgtcacctacaagggcgtcgcggcggccgtcggcgtc
accggggccaccgtcagcgccgtgtgcaggaagctgcgcccgcacgcgcagatgctcttc
gggtatagcgtgcctgccaccattgctgcttgctgtgtccgtcctctccgtgtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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