KEGG   Brachypodium distachyon (stiff brome): 100826085
Entry
100826085         CDS       T01717                                 
Name
(RefSeq) histone deacetylase 5 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bdi03036]
    100826085
Enzymes [BR:bdi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100826085
Chromosome and associated proteins [BR:bdi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     100826085
SSDB
Motif
Pfam: Hist_deacetyl DUF3549
Other DBs
NCBI-GeneID: 100826085
NCBI-ProteinID: XP_003559993
UniProt: I1GSM0
Position
1:complement(17894038..17901630)
AA seq 709 aa
MAAASAAPAAAGAAHPVGAAPRVGLLYDERMCAHATPDGKYHPENPERLRAIWKKLGEQG
VAERCVIMPAKEAKDKYIASVHSSTHVKLMKSISSKEHNYRRKNLASNYNSIYFNEGSSE
SAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEPMGFCLFNNVAIAANYLLNER
PDLGIKKILIVDWDVHHGNGTQKMFYNDSRVLFFSVHRFDHGAFYPSQGDASHCFIGEGD
GQGYNINVPWNHGGCGDADYIAAWDHVLLPVAEAFDPDIILLSAGFDAARGDPLGGCDVT
PDGYARLLTKLLGFAKGRMVMALEGGYNTVSIANSVLFCAKVLLGDQFRLKPPKDSPFDS
TWNVIKEVRDELKTCWPVLRSKLPKNVPLRSSSSYVELYSSSGSECDVEDDNERPDANSS
VSIIQVDDDVVSERIAMLTLDEDNLATKTTSSCTTDERRATDSVQAQNDGFVVASTGIYG
QSLTWRSALSRVYVWYASFGSNMWKPRFMCYIQGGKVDGMSIACFGSHDTSPPRGAMWKT
VPHRLFFGRSSTPCWGAGGVAFLNPETNYNEKSWICMYKITLEQFNDVLFQENRLVKDDN
EGGKAESPDSPLIGLSEIESLSSNKALHLEPIKDSWYSNVLYLGQEDSIPILTMTCPSLD
VVRHKAGELPLSPPSDTYSATLIRGLVEGKQLDANEAASYIDAAAARGL
NT seq 2130 nt   +upstreamnt  +downstreamnt
atggccgcagcgtcggcggcgccggcggcggcgggcgcggcgcatccggtgggtgcagcg
ccccgggtggggctgctgtacgacgagaggatgtgcgcgcacgcgacgccggacgggaag
taccacccggagaaccccgagcggctgcgggccatctggaagaagctcggcgaacagggt
gtcgcggaaaggtgtgtgatcatgccggcgaaggaagccaaggacaaatatatagcttca
gtccatagctcgacccatgtaaaactgatgaagagtattagctcgaaggaacacaattat
cgtcgaaaaaatcttgctagcaactataattccatttacttcaacgagggctcctcagag
tctgcttttcttgcagctggttctgtcattgaggtcgctgagaaggttgcagctggtgag
ttgagttctgctatcgctctcgtcagacctcctggccaccatgccgaacataatgagcca
atggggttttgtctcttcaacaatgtggccattgcagctaattatctcttaaacgagagg
cctgatttaggtatcaagaagatattaatcgtcgattgggatgttcatcatggaaatggt
acacagaaaatgttctataatgactctcgtgtattgttcttttcagttcacagatttgat
catggagctttctaccctagtcaaggggatgcatctcactgtttcattggagaaggagat
ggtcaggggtacaacattaatgtgccctggaatcatggaggatgcggcgatgcagattat
attgctgcatgggaccatgtgctgcttcccgtcgcagaagcatttgatcctgatataata
ttactgtctgctgggtttgatgcagcgaggggtgatcctcttggtggttgcgatgtcacg
ccagatggatatgcacgcctactaacaaagctgttaggttttgcaaaaggaaggatggtg
atggctcttgaagggggttataacacagtgtccatagcaaattcagttttattttgcgca
aaagttttgttgggagaccagttcagacttaaacctccaaaggattcacctttcgattct
acatggaacgttattaaagaggtacgtgatgaattaaagacgtgttggcctgttttacgc
agtaagcttccgaagaatgtacccttgaggagttcatcctcatacgtcgagctgtactct
tcctctggttccgagtgtgatgttgaagatgataatgagcgtcctgatgccaattcatct
gtcagtattattcaagttgatgatgatgttgtaagtgagcgcatcgcaatgttgacactt
gatgaagataaccttgcaacgaagaccacatcaagttgcacaacagacgaacgaagggca
actgattcagttcaagcacaaaatgatggatttgtcgtggcgtctacaggaatatatggc
caatctcttacttggagatcagcattgtcaagagtttatgtttggtatgccagctttggt
tcaaacatgtggaaaccaaggttcatgtgctacattcaaggggggaaggttgatggtatg
agtatagcatgttttggttcacatgacacaagcccaccaagaggtgccatgtggaagact
gtgcctcataggttgttttttgggagatcctctaccccttgctggggtgctggtggcgtt
gctttcctcaaccctgagacaaactacaacgagaagtcatggatctgcatgtacaaaata
acgctcgagcagtttaatgatgtattgtttcaagagaaccgtttagttaaggatgacaat
gaaggtggaaaagctgagtctcctgactctcctcttattggcttgtccgaaatagagtct
ctctcttcaaacaaagctcttcatcttgaacctattaaggatagctggtactccaatgta
ctttatcttggacaggaggattccattccgattctaactatgacatgcccctcattagat
gttgtgaggcacaaagccggtgagctgccattgtctcctccatcggacacctactccgcc
actctcatcaggggactcgtggaagggaagcagctggacgccaatgaagctgcaagttac
atcgatgctgctgctgcaagaggcctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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