KEGG   Brachypodium distachyon (stiff brome): 100826227
Entry
100826227         CDS       T01717                                 
Name
(RefSeq) periodic tryptophan protein 2
  KO
K14558  periodic tryptophan protein 2
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100826227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bdi03009]
    100826227
Ribosome biogenesis [BR:bdi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100826227
SSDB
Motif
Pfam: WD40 Utp12 ANAPC4_WD40 NBCH_WD40 WD40_like WDR54 Nup160 Utp21
Other DBs
NCBI-GeneID: 100826227
NCBI-ProteinID: XP_003568083
UniProt: I1HHI5
Position
2:complement(17207899..17212146)
AA seq 881 aa
MNYRFQNLLGAPYRGGDAVFAGDSSVLLSAVGNRVATTDLTASSSLTLPFESASNITRLA
TSPSGDFLLATDDAGRALYANLSRRAVLHRITFKGAPSAVRFSPDGELIAVAVGKVIQIW
RSPSFRKEFFPFHLLRTFPGFAAGVTSFDWSPDSAFLLASCKDLTARLLPVKKGLGGKPF
LFLGHRAAVVGAFFATDKKTGRVHGVYTVSKDGAIFTWNLVEDNDSTPPPSPGTPEQESI
QNDEPELEGESRKRKHLGELEEPSITPLHLAKWELQKKSFFMQSLAKLTACDYHRDLDMV
VVGFSNGVFGLYQMPDFVCLHLLSISREKITTAIFNSLGNWLVFGCAKLGQLLVWEWRSE
SYILKQQGHYFDVNCIAYSPDSQLLATGADDNKVKVWTASSGFCFITFSEHTNAVTAVHF
MANNHSLLSASLDGTIRAWDLFRYRNFKTFTTPSPRQFVSLTADQSGEVICAGTLDSFEI
YVWSMKTGRLLDVLSGHEGPVHGLMFSPISAILASSSWDKTVRLWDVFESKGAAETFLHS
HDVLTLAYRPDGRQIASSTLDGQINFWDPFDGLLMYTIEGRRDVSGGRLMTDRRSAANTS
IGKYFTTLCYSADGSYILAGGNSKYICMYDIGEQVLLRKFQITRNLSLDGVLDFLNSKRM
TDAGALDLIDDEDSDIEDGVDQQTRGNLGYGLPGAMANRGRPVARTKCVKFAPTGRSFAA
ATTDGVLLYSVDESFIFDPTDLDIDVTPEKVEEALAENQQHRALLLSLRLNEDNLIKKCI
FAVDPSNVRAICSSVPFKYLQRLIDAFADLLESCPHLEFILLWSQELCKVDGNYIQQNSR
ALLPALKSLQKSITKLHQDLADTCSSNEYLLKYLCSAGTKN
NT seq 2646 nt   +upstreamnt  +downstreamnt
atgaactaccgcttccagaacctcctgggagcgccgtaccgaggcggcgacgccgtattt
gccggggactcctccgtgctcctctcggcggtcggtaatcgcgtcgcgaccaccgacctc
accgcgtcctcctccctcaccctccccttcgagtcagcctccaacatcacccgcctcgcc
acctccccgtcgggagacttcctcctcgccacggacgacgccggccgcgcgctctacgct
aacctcagccgccgcgccgtcctccaccgcatcaccttcaagggcgccccctccgccgtg
cgcttcagccccgacggcgagctcatcgcagtcgccgtcggaaaggtcatccagatctgg
cgctcgccctccttccgcaaggagttcttccccttccacctcctccgcaccttccctggc
ttcgccgccggcgtcacctcctttgactggtcccctgactccgcgttcctcctcgcctcc
tgcaaggacctcacagcccgcctcttgcccgtcaagaagggcctcggaggcaagcccttt
ctcttcctcggtcaccgcgcagctgtcgtcggagccttctttgccacggataagaagaca
ggcagagtccacggggtctacacagtttcaaaagacggagctatcttcacatggaatttg
gtggaagacaatgattctacacccccaccttcaccagggacgccagagcaggagtcaata
cagaatgatgagccagaattggaaggtgagagcaggaagaggaagcatttgggggaactg
gaagaaccgagcattactccactgcatttggctaagtgggagttgcagaaaaagagcttc
ttcatgcaatcactagctaagttaacagcctgtgattaccatagggatcttgacatggtg
gtggttggattctctaacggagtatttgggctgtaccagatgccagattttgtgtgcctc
cacttgctgtcaatatcaagggagaagataactactgctattttcaacagcttggggaat
tggctggtttttggatgtgctaaacttgggcagctgttggtatgggagtggcggtcggag
agctacattttgaagcagcagggacactactttgatgtgaactgcattgcatactcacca
gattctcagttactggccactggagctgacgataacaaagtcaaggtctggacggcttcc
tctggcttctgtttcataacattttctgagcatacaaatgctgttactgcagttcatttt
atggccaataaccattctcttctcagtgcctcccttgatgggactattcgggcgtgggat
ttgttccgttatcggaacttcaaaacatttacaaccccttcgcctagacaatttgtttcc
ttaacagcagatcagagtggagaagtaatatgtgctggaacacttgattcatttgagata
tatgtttggtcaatgaagactggtcgtttgttggacgtcctcagtggccatgaaggacca
gttcatggtctaatgttttcacctatcagtgctattttggcttcgtcatcgtgggacaag
accgttcgtctctgggatgtatttgagagcaagggtgctgctgaaacttttctgcactca
catgatgttcttactttagcttatcgtccggacggaagacagatcgcatccagcacgtta
gatggccaaatcaatttttgggatccttttgatggcttgttgatgtatacaattgaaggc
cgcagggatgtttctggcgggcgcctcatgactgatagaagatctgctgcaaatacaagt
atagggaagtacttcacgacactgtgctattctgctgatggtagctatattttagctgga
ggaaacagcaaatacatatgcatgtatgatattggagaacaggtgctgttgcgtaaattc
cagatcacccgcaatctttcgttggatggagttcttgattttctgaactcaaaaaggatg
actgatgctggtgcactagatctaattgatgatgaagatagtgatattgaggatggagtt
gatcaacaaacaagaggaaacttggggtatggtttacctggagctatggcaaatcgtgga
agacctgtagctcggacaaaatgtgtgaaatttgccccgacaggaagatctttcgctgca
gcgaccactgatggtgttctgttgtactcagtcgatgaatcttttatttttgatccaaca
gatcttgacattgatgttactcctgagaaagtggaggaagctcttgcggagaaccaacaa
catagagcccttctgttaagccttcggttaaacgaagacaacttgattaagaaatgcatt
tttgctgtggatccatcgaatgtacgagcaatttgctcatcagtaccctttaagtatctt
cagagattgatcgatgcattcgctgaccttctggaaagttgtccccatctggaatttatc
ctcctatggtctcaggagctatgcaaggttgatgggaattacattcagcaaaactccaga
gccttgctccctgctctcaagtcattgcagaagtctataacaaaactacatcaggatctg
gcggacacatgttcttctaacgagtacttgctgaaatatctgtgctctgctgggacaaag
aattag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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