KEGG   Brachypodium distachyon (stiff brome): 100830100
Entry
100830100         CDS       T01717                                 
Name
(RefSeq) polygalacturonase isoform X1
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi00040  Pentose and glucuronate interconversions
bdi01100  Metabolic pathways
Module
bdi_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    100830100
Enzymes [BR:bdi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     100830100
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 Beta_helix End_N_terminal NosD
Other DBs
NCBI-GeneID: 100830100
NCBI-ProteinID: XP_003566989
Position
2:complement(46627802..46630133)
AA seq 424 aa
MASNVLAFSAFRIVPLLVCCVLAKGHMEVIPLTNGVDHRGRFLASNNVFNVLRYGAHGDG
RHDDTKALEKTWAAACSSSHPGILLIPKGNKYLTKHVTFSGPCKSNIKLMIEGTLVAPQK
RSYWIEQTIRHWILFKAVRGLTVTGGGTIDGNGKIWWQNSCKVNAELPCRQSPAALTFYS
CTNLKVNNLELLNSQQIHMSVECCSDVRISRLSITAPSTSPNTDGIHIAHSKDVKVRDCA
IKTGDDCMSIEDGTKNLHVKNIVCGPGHGISIGSLGDRNSEAEVANITIDGVRLHGTTNG
ARIKTWQGGRGYAKNIVFQNIIMDNVWNPIIINQNYCDSATPCKKQQSAVEVSNVLFKNI
RGTSASREAIKLNCSPTVPCHGIALHNVRLTLKRGSGDAKSTCHNAQWRKLGTVMPQPCN
LNNN
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcctccaatgtgctcgctttctctgcgttccgtatagtgccattgttagtgtgctgt
gtactcgccaagggacacatggaagtgatccctttgacaaatggggttgatcacagaggc
cggtttctagcttcaaataatgtcttcaatgtgctcagatatggggctcatggggatgga
cgccatgatgacacaaaggcactggaaaagacgtgggctgcagcttgctcctcttctcat
cctggcattctgctcattcccaagggcaataaatacctcacgaagcatgtaaccttttct
ggcccatgcaaatccaatattaagttaatgatagagggtactttggtggctcctcaaaag
agatcatattggatcgagcaaaccattaggcactggattctgttcaaagctgtgagaggt
ctgactgtcactggtggtgggaccattgatggaaatggcaagatatggtggcagaactcc
tgcaaagtaaatgcagaactcccttgcagacaatctccagcagctttgacgttctactct
tgtacaaacctgaaagtaaacaatttagaactgttaaatagccaacaaatccacatgtca
gtggagtgttgcagtgatgtaaggatatcccgcctatcaatcacagcccccagcactagc
cccaacactgacggcatccatatcgcccatagtaaggatgtgaaagtcagagactgcgca
atcaagactggggacgactgcatgtcaatcgaggacggaactaagaacctacatgtgaag
aacatcgtgtgtggaccaggtcatgggatcagcattgggagcttaggtgatcgcaactct
gaagctgaagttgcaaatatcaccatcgacggtgtgcgactacatggcacgacaaatgga
gctcgtatcaagacatggcaggggggacgtggttatgcaaagaatatcgtgttccagaac
ataatcatggataatgtatggaacccaatcattatcaaccagaactattgcgactctgct
acaccatgtaagaaacagcaatcggcagtggaggtgagtaatgtgttgtttaagaacatc
aggggtacaagtgcctcaagagaagctatcaagctgaattgcagtccaactgtaccttgc
catggcatagccttgcacaatgtcaggcttactctaaaacgaggtagtggtgatgcaaag
agcacttgccacaatgcacaatggaggaaactgggaacagttatgccacagccatgtaat
ctcaataataattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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