KEGG   Brachypodium distachyon (stiff brome): 100830765
Entry
100830765         CDS       T01717                                 
Name
(RefSeq) formin-like protein 5
  KO
K12875  apoptotic chromatin condensation inducer in the nucleus
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03013  Nucleocytoplasmic transport
bdi03015  mRNA surveillance pathway
bdi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100830765
  09122 Translation
   03013 Nucleocytoplasmic transport
    100830765
   03015 mRNA surveillance pathway
    100830765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100830765
   03041 Spliceosome [BR:bdi03041]
    100830765
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100830765
Spliceosome [BR:bdi03041]
 Complex C
  Other components
   EJC/TREX
    100830765
SSDB
Motif
Pfam: RSB_motif SAP Glyco_hydro_59
Other DBs
NCBI-GeneID: 100830765
NCBI-ProteinID: XP_003557810
UniProt: C3SA89
Position
1:60589656..60594096
AA seq 713 aa
MSSFPVLKNRPIDQWKVTELKDELRKRKLPVKGLKEELVRRLFDSIQSEAEDEATEDVGA
DAAMDKATEVVGAHAQVDEAAKDVGVNEPVNLASERHTISQTTTTISVTEVREETVVHGT
QEITVPLREVTQEASLEEAHEHPSTEAPTVQEGHPNAESNAVLGAEKTPEIVTNETIVVD
DMTSADFKSDLTSSEVKSDAAEDMVPAPVDAQVSNADPMDTDIAAASMNDDGEKLVSKND
FGNNISIYDEECKNSELVNEDCEPVISKSNNQVPEISPDLGSPVKCESISSDDISNNKKN
IKDNLNANNFDLELEVKPEMVKPSSGITSLGGDLEQLGDDKELVKNQLSLEDMDTTANVE
EVGSPEKLNLDRSSGDESMEEDVMEIKQVDSNIKSDDLRGKTENVKEVALPDPVVEGSSV
DTNEVKAEEKLAASTEKRKLQAEETVVSTEPIKRQRRWTADSGKVPERQPLNQSDSDAPK
EIFQPALKRSFGRSDSTASGDSPKERIVPPSQKPATTSLRIDRFVRPFTLRAVQELLSKT
GSVCSFWMDHIKTHCYVTFSSVEEATATRNAVYNLQWPPNNGNHLLAEFVDPQEVKLKLE
PPPPAAAAVAAPISPATTPKAPPFQQAQANQSVPRQATTPREQLPPPPPLMKPPTSDPAS
ARDKLPPTPKKPEPPVVTLDDLFRKTQSSPRIYYLPLSDEEVSAKLAAQGKAK
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgtcgtcatttcctgtgctaaagaaccgacctatcgatcagtggaaagttactgagttg
aaggatgaactccgaaagaggaagctccctgttaaaggtctgaaagaagaactggtgagg
cgtctgtttgactctattcagagtgaagcagaggacgaagccactgaagatgttggagca
gatgcagcaatggataaagccactgaagttgtgggagcgcatgcacaagttgatgaagct
gctaaagatgtgggagtgaatgaaccagttaatctggcttctgaaagacacaccattagt
cagacaacaactacaatttctgtgacagaagttagagaggaaacggtggttcatggaact
caggaaattacagttcctcttagagaggttactcaggaggcctctctggaagaggcccat
gaacatccctcaactgaagccccaacagtgcaagaagggcacccaaatgctgaaagtaat
gcagttctcggtgctgagaagactccagagattgtcaccaatgagacaattgttgttgat
gacatgaccagtgctgatttcaagtcagacctgacctcttctgaagtcaagtcagatgct
gctgaagacatggtgccagcacctgtggatgcccaagtatcaaatgctgatcctatggat
actgacattgcagctgcatcaatgaacgatgatggggagaagctggtttctaagaatgat
tttggcaacaatatttcaatctatgatgaagagtgcaaaaattctgagctcgtgaatgag
gattgcgagcctgtcatatcaaaatcaaacaatcaggtacccgagattagcccagattta
gggtctccagttaagtgtgagtcaatttctagcgatgatatatcaaataacaaaaagaat
ataaaggataacttaaatgctaataattttgatttagaactagaggttaagccagagatg
gtcaaaccatcatccggcattacttccttaggtggagatttggagcaattgggtgatgac
aaagagctggtcaagaaccagttgtctttggaagacatggataccactgctaatgtggaa
gaagttggttctccagaaaaactaaatttagacaggagttcaggtgatgagtcaatggag
gaggatgttatggagattaagcaagttgactccaatattaaatctgatgatctcagagga
aagactgagaatgtgaaagaggtggctctacctgatcctgttgttgagggttcatctgtt
gatacaaatgaagttaaagctgaggaaaagctagcagcttcaactgaaaagaggaaactt
caagctgaagaaacagttgttagcaccgagccaatcaaacgtcaacgtcgatggactgca
gacagtggcaaagtcccagagagacaaccattgaatcaaagtgattctgatgctcctaag
gaaatatttcagcctgcattaaaacgttcttttggcaggtctgattcaacagcaagtgga
gattctccgaaggagcggattgtgccaccatcacagaaacctgcaacaacttccttgaga
atcgaccgatttgtacgcccctttaccctgagagctgtgcaagagcttcttagtaaaact
ggatctgtttgtagcttctggatggatcatatcaagacccactgctatgttacattctcc
tcggtggaggaagctactgctactcgcaatgctgtctacaacctgcagtggcccccgaac
aatggcaatcatttgttagctgaatttgttgatccccaggaagtgaagctcaagcttgaa
ccccctcccccagcagcagctgcggtggcagctcctattagcccagccactacgccaaag
gcgcctccatttcaacaagctcaggctaatcaaagtgtgcctcgccaagctacaacacca
agagagcaattgccgcctccaccaccccttatgaagcctcctacatctgacccggcatca
gcaagggacaagctcccgcccaccccaaagaagccagagcctcctgttgtgacacttgat
gatctcttcaggaagacccaatcctctccaaggatttactatctgcctttatcagacgag
gaggtatcagctaagcttgctgcacagggcaaagcaaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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