KEGG   Brachypodium distachyon (stiff brome): 100831775
Entry
100831775         CDS       T01717                                 
Name
(RefSeq) DNA polymerase delta small subunit
  KO
K02328  DNA polymerase delta subunit 2
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03030  DNA replication
bdi03410  Base excision repair
bdi03420  Nucleotide excision repair
bdi03430  Mismatch repair
bdi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100831775
   03410 Base excision repair
    100831775
   03420 Nucleotide excision repair
    100831775
   03430 Mismatch repair
    100831775
   03440 Homologous recombination
    100831775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bdi03032]
    100831775
   03400 DNA repair and recombination proteins [BR:bdi03400]
    100831775
DNA replication proteins [BR:bdi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    100831775
DNA repair and recombination proteins [BR:bdi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      100831775
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     100831775
SSDB
Motif
Pfam: DNA_pol_E_B DNA_pol_D_N
Other DBs
NCBI-GeneID: 100831775
NCBI-ProteinID: XP_003558911
UniProt: I1HA74
Position
1:73350457..73354255
AA seq 429 aa
MERKQADYSTLDERYTIQGERYQGQQYSHIYFTRLHHMRNILRALVPSRKPHLPVTTVLG
LEEGKDCVLVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDNLILEDESGRVAL
AGAISPAAYVTGVVVALHGKETSAGNFLVEDVLEAGLPPQTALPSINEDKYVVFVSGLSV
GSSAFNPLQFQLLIDHITGHLGDENEQAIASNIVRVVVVGNSVHIAPRFLNGQTVASKDQ
PRIAEPIIELDIMLTQLVASLPVDIMPGCNDPANFSLPQQPLHRCLFAGASTYNTFSSCP
NPHQFDLDNVKFIGTSGQNIDDLYRYSDAKDRLEFMERTLTWRHLAPTAPNSLGCYPYTD
KDPFLIESCPHVYFVGNQDRYETRLLQGSEKQQVRLISIPRFSDSGIAVMLNLRNLECST
LSFSTNFDS
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggagaggaagcaagccgactacagcaccctggacgagaggtacacgatccagggggag
aggtaccaggggcagcagtacagccacatctacttcacgcggctccaccacatgcgcaac
atcctccgcgccctcgtcccctcccggaagccgcacctccctgtcactactgtgttggga
cttgaagaaggaaaggattgtgtgcttgttgggactttatacaagcacatgaaactgaag
ccgtctattcttgacgaatactccaaggagaggtctgcaatccctcttgttaagccacac
aatttcatgcatcctgatgataatctcattctggaagatgaaagtggaagagttgccctt
gcaggagccatatctccagcagcatatgtgactggggttgtagtagcactccatgggaag
gaaacaagtgctggcaacttccttgttgaagatgttcttgaggctggtcttcctcctcaa
actgcattgcctagcataaatgaggacaagtatgttgtattcgtgtcagggttaagcgtc
gggagcagcgcattcaatcctctgcagttccaacttcttattgaccatatcactgggcat
ttgggtgatgagaatgaacaagccatagcatcaaatatagttcgtgttgtggtggttgga
aattcagtacatattgcaccaaggttcttgaatggtcagactgtagcgtcaaaagatcag
cctaggatagccgagccaatcatagaactggatataatgctgactcagcttgtggcgtca
ttgcctgtagatataatgccagggtgcaatgatccagcaaatttttctttgcctcagcag
cctttgcatagatgccttttcgctggagcatctacttacaatactttttcgtcatgtccg
aatccacatcagtttgatcttgacaatgtcaagtttattggaacatctggccagaacata
gatgacctctacagatactcggatgcgaaagacaggctggaattcatggaaagaacattg
acatggcgccatcttgctccaactgcaccgaacagcctaggatgttatccatacacagac
aaggaccctttcctcattgaaagttgtccccatgtttactttgtcgggaatcaagataga
tatgaaacacggctgttgcaaggatccgaaaaacagcaagtgaggctaatcagcattccg
agatttagcgatagtggaatagccgtcatgctcaatttgaggaacttggaatgcagcacc
ttgagtttctcgacaaactttgattcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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