KEGG   Brachypodium distachyon (stiff brome): 100833118
Entry
100833118         CDS       T01717                                 
Name
(RefSeq) serine--tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    100833118
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:bdi01007]
    100833118
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bdi03016]
    100833118
Enzymes [BR:bdi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     100833118
Amino acid related enzymes [BR:bdi01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   100833118
Transfer RNA biogenesis [BR:bdi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    100833118
 Prokaryotic type
    100833118
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N YlqD FapA TMF_TATA_bd
Other DBs
NCBI-GeneID: 100833118
NCBI-ProteinID: XP_003558579
UniProt: I1H8J9
Position
1:complement(69540676..69544820)
AA seq 456 aa
MLDINLFRKEKGGDPDLVRNSQRSRFASVELVDEVIVLDEEWRQRQFELDKIRQELNKTS
KEIGKLKAKRLDATVLIQSTEEIKSRLAAKETEVQDAKSTLDAKLVTIGNLVHESVPVSN
DEANNAIVRTWGERRLEGNLKNHVDLCIMLDIVALEKGADVAGGRGYFLKGNGVLLNMAL
INFGLAFLGIRGYTQMQTPFFMRKETMARCAQLAQFDEELYKVTGDGEEKYLIATSEQPL
CAYHLGDRIYPADLPIRYAGYSTCFRKEAGSHGRDTAGIFRVHQFEKIEQFCVTSPNDNN
SWELHEEMIKNSEDFYKEIGLPYQLVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCS
NCTDYQARRLGIGFGQKKNDEQSKQFVHMLNSTLTATERTLCCILENFQKEDGVEVPKAL
RPFMGGIDFLPFKKPLDSKQAADSKPNKSKPKGNAA
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgctcgacatcaacctcttccgcaaggagaagggcggcgaccctgaccttgtacgcaat
tcgcagcgcagccgcttcgcctccgtcgagctcgtcgacgaggtcatcgtgctcgacgag
gagtggcgccagaggcagtttgagcttgacaagatccggcaggagctcaacaaaaccagc
aaggagatcgggaagctcaaggccaaaaggctggatgcaacggtgctgatacagagcaca
gaagagattaagagcagattggccgccaaggagacggaggtgcaggatgccaagagcacc
ctcgatgccaagctcgtcaccattggcaacctcgtgcatgaatctgtgcccgtcagcaac
gacgaggcaaacaatgctattgtacgtacatggggagaaaggaggttggaggggaacttg
aagaatcatgtggatctttgcataatgcttgacattgtagctctggagaagggtgctgat
gtagctggtggaagaggttactttttgaagggtaatggtgtcctcctgaacatggcgttg
ataaattttgggctagcattcctgggcatacgaggctacactcaaatgcaaactcctttt
ttcatgagaaaggaaactatggcaagatgtgcccagttggcccaatttgatgaggagctt
tacaaagtaacaggagacggagaggaaaagtatctcatagctacatccgagcaaccactg
tgtgcttaccatctaggtgaccggatctatcctgccgatttgccaattagatatgctggg
tactcgacctgcttccggaaagaagctggttcgcacgggagggacacagctggcatattc
agagtccaccagttcgagaagattgaacagttctgtgttacaagtccaaatgacaataat
tcctgggaattgcatgaagagatgattaaaaattcagaagatttttataaggagattggc
ctaccatatcaacttgtttcgattgtgtctggtgctcttaatgatgctgcagctaagaag
tatgatctggaagcatggttcccagcatccaaaacctacagagaattagtgtcctgttcg
aattgcacagattatcaagcaaggaggcttggaataggctttggccagaaaaagaatgat
gagcaatccaagcagtttgttcatatgttgaattctacactgactgcaactgagaggacc
ctctgctgtattctggagaacttccagaaggaggatggtgttgaagtgccaaaggcactg
cgaccattcatgggtggaatagatttccttcctttcaagaaacctcttgatagcaaacaa
gctgctgactccaaacccaataagtctaaacctaagggaaatgctgcttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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