KEGG   Brachypodium distachyon (stiff brome): 100834429
Entry
100834429         CDS       T01717                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
  KO
K13181  ATP-dependent RNA helicase DDX27 [EC:3.6.4.13]
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bdi03041]
    100834429
   03009 Ribosome biogenesis [BR:bdi03009]
    100834429
Enzymes [BR:bdi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     100834429
Spliceosome [BR:bdi03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    100834429
Ribosome biogenesis [BR:bdi03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    100834429
SSDB
Motif
Pfam: DEAD Helicase_C
Other DBs
NCBI-GeneID: 100834429
NCBI-ProteinID: XP_003576182
UniProt: A0A0Q3EG88
Position
4:6281397..6292023
AA seq 780 aa
MDPDFRFDPDGSDDEAAAASARRKPAQSPWEFSSYTESVAAEHARRRTTSIDEKISQALR
GRRNPSRPYGSDGEEEEEDADDSDEEPVKGETGDEEEELEESDGDEDIEESDEEEEVKEG
DSEEKEEEQGEEEEEEEDGEEEEAVQEDEAIAEQSSTPDPSKFFSSSEGASFKANSFLEL
NISRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERLLFR
PKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLPTKVQEVALRSNPDIV
VATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSVEINELIRMCPKRRQTMLFSA
TMTEEIDELVKLSLNKPVRLEADPSLKRPATLTEEVVRIRRSREANQEAVLLALCLKTFK
ERVIIFSGTKHSAHRLKIMFGLSGMKAAELHGNLTQAQRLEALELFKKQEVDILIATDIA
ARGIDIVGVRTVINFACPRDVKTYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAKKAG
SQLKSRIVAEKPVADCAKLIDQLENQISNIIQEEREEMALRKAEMEATKAENMIAHKDEI
YSRPKRTWFATEKEKKLLAKAAKESLGQVKSSSGVVSAQDAEDLRLKEKRRREREKNLPR
KKRRKLEAQREMLEDEKEDEEETQESKGGKKAKNSQSVVDVAYRKAKSLKATGKKDGKGK
NEKAKQPSEKGQTRQEEMHELFQSDMSEWKQGRSLKKKDSSFAKKSKNSFKSKSRYKRRK
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggaccccgacttccggttcgacccagatggttccgacgacgaggcggcggcggcctcc
gcgcggcgcaagccggcgcagtctccctgggagttctcgtcgtatacggagtccgtggcg
gcggagcacgcgcgccgccgcaccacctccatcgacgagaagatctcccaggccctccgt
ggccgacgcaacccctctcgcccttatggctccgacggggaggaggaggaggaggatgct
gatgatagcgacgaggagccggtgaagggggagactggggacgaggaggaggagctagag
gagagcgacggcgacgaagatattgaggagagtgacgaggaggaagaggtcaaggagggc
gacagtgaggaaaaggaggaggagcaaggagaagaggaggaggaggaggaggatggggaa
gaagaggaggctgtacaagaggacgaagctatagctgaacagagcagcactccagatcct
tctaaatttttttcatcgtccgaaggagcatcgttcaaagcaaattcgtttcttgagctc
aacatatcacgtcctcttcttcgagcttgtgaagcacttggctatcaaaaaccaacgccg
attcaggctgcatgcatacctttagcattaacaggacgggatatatgtggtagtgctata
acaggatcagggaagacagctgcattctctctgcctgtgctcgagcgtctacttttccgg
ccaaaacgtgtgcctgcaattagggtgcttattcttactccaaccagagagttggctgct
caggtccatagtatgattgagaaattagcccagtttactgatatcaggtgctgtctcata
gttggtgggcttccaactaaggtgcaagaggtagctttaaggtcaaatcctgacattgtt
gttgctactcctgggcgcataatagatcatctacgcaattctctttctgttgggcttgaa
gatcttgcgattttgatccttgacgaggccgaccgtttgctagaattgggtttcagtgtt
gaaattaatgaactgattcgcatgtgtcctaaaagaaggcagacaatgctattctctgcc
acaatgacagaagaaattgatgaactcgtgaaactttccctaaacaaacctgtccgtctt
gaagctgatccttcgctgaaacggcccgcaacgttgactgaagaggtagttagaatacga
cggtcacgtgaagcaaatcaagaagctgttttgcttgctctctgtttgaagaccttcaag
gaaagagtaatcatttttagtgggacaaagcattctgctcacagattaaaaataatgttt
ggtctgtccgggatgaaagctgctgaacttcatggcaaccttacacaggcgcagcggctt
gaggctttagagctattcaaaaagcaagaagtggatatccttatcgcaactgatattgct
gctcgtggaattgatattgttggtgttcgaactgtaataaattttgcctgcccacgggat
gtcaaaacttatcttcatcgtgttggccgtactgctcgggcgggcagggaaggatatgcc
gtcacatttgttactgatgatgatagatccctcttgaaagctattgcaaaaaaagctggt
tcacagctgaaaagccgcattgttgcagagaaaccagtggctgattgtgcaaaattgatt
gaccagctggaaaaccaaatttccaacataattcaagaagaaagggaggaaatggcattg
aggaaagctgaaatggaagctacaaaggcagaaaatatgatagctcacaaggatgagata
tactcacgacctaagagaacctggtttgctactgagaaggagaagaagcttttggcaaag
gctgctaaagaatccctgggtcaagttaaaagtagctctggagttgtgagtgctcaggac
gctgaggatcttcgtctgaaggaaaaaaggagaagagagcgtgagaaaaatctaccaagg
aagaaacgccgaaaattggaggcgcaaagggagatgttagaggacgagaaggaagatgag
gaggaaactcaggaaagcaaaggagggaagaaagcaaagaatagtcaatctgtagttgat
gtggcttatcgtaaggcaaaatcattgaaggcaactggtaaaaaagatggcaaaggaaag
aatgagaaggcaaaacaaccatcggaaaagggccagactaggcaagaggaaatgcacgaa
ctgttccagagtgatatgagtgaatggaaacagggccgctccttgaagaaaaaggacagc
tcttttgcaaagaaatctaagaattcttttaagagtaaatcaaggtacaagcggcgaaaa
tag

DBGET integrated database retrieval system