KEGG   Brachypodium distachyon (stiff brome): 100834834
Entry
100834834         CDS       T01717                                 
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bdi04131]
    100834834
   04121 Ubiquitin system [BR:bdi04121]
    100834834
Enzymes [BR:bdi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100834834
Membrane trafficking [BR:bdi04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    100834834
Ubiquitin system [BR:bdi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100834834
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zinc_ribbon_9 zf-C3HC4 zf-RING_11 zf-rbx1 zf-RING_UBOX zf-C3HC4_3 zf-ANAPC11 zf-RING_5 Rad50_zn_hook zinc-ribbons_6 HypA zf-Nse zf-RING_16
Other DBs
NCBI-GeneID: 100834834
NCBI-ProteinID: XP_003557912
UniProt: I1H5F8
Position
1:61819915..61821771
AA seq 288 aa
MSGGRQSYWCFQCRQRVRPRGREMECPYCDSGFVAEMDDVDAVMSQFVGMDTDFHRDPRF
GIMEAMSAVMRHGMGGMNRDVDVRGRPSILTDLEMEFGSGPWLLFRGQLPGHLSEDNGFD
VIVNGRRGVGMRRANIADYFVGPGLDDLIEQLTHNDRRGPPPASQSSIDAMPTVKITPRH
LTGDSHCPVCKDKFELGSEAREMPCKHLYHSDCILPWLEQHNSCPVCRYELPTQGSTGAS
CSRSRSTNQNHNSSSSSNSGRAGVRQRRRNPFSFLWPFRSSSSSSSSR
NT seq 867 nt   +upstreamnt  +downstreamnt
atgtcgggaggtaggcaatcatactggtgcttccagtgtagacagcgggttaggcctcgt
ggccgggagatggagtgtccctactgtgattctggttttgtggctgaaatggatgatgtg
gatgctgtcatgagccaatttgttgggatggatactgatttccatcgcgatccaaggttc
gggatcatggaggcaatgtctgccgtgatgcgacatggtatgggtgggatgaatcgagat
gtggatgtaagaggaaggccaagcatattaactgacctggagatggagtttggctcaggg
ccatggttgctcttccgtggtcagctccccggtcatctctcagaggacaatggtttcgat
gtgattgtcaatggacgccgtggtgttggcatgcggagggcaaacattgcagattacttt
gttggacctggattggatgatctaattgagcagttgactcataatgatcgtcgagggcca
ccacctgcctctcagtcctcgattgatgccatgcctactgttaagatcacaccgaggcat
ctcactggcgactcgcactgcccggtctgcaaggacaaatttgagctgggatcagaagca
agagagatgccatgcaagcatctatatcactctgattgcatacttccttggctagagcaa
cacaattcctgccctgtttgccgatatgagctgccaacacagggctctactggcgctagc
tgctcgcgatcaagatcaaccaaccaaaatcacaattcaagtagttcaagtaacagtggg
agagccggtgtgcgtcagaggagaaggaaccctttctcgttcctgtggcctttccgctca
tcaagttcaagctctagttctcgttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (29)   

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