KEGG   Brachypodium distachyon (stiff brome): 100835393
Entry
100835393         CDS       T01717                                 
Name
(RefSeq) nuclear pore complex protein NUP62
  KO
K14306  nuclear pore complex protein Nup62
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100835393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100835393
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100835393
SSDB
Motif
Pfam: Nsp1_C Nucleoporin_FG NAP APG6_N SGT1 COG3_N
Other DBs
NCBI-GeneID: 100835393
NCBI-ProteinID: XP_003564647
UniProt: A0A0Q3N202
Position
2:complement(53802884..53812636)
AA seq 729 aa
MASSFAFGTSGAAGSTASPFSFTTAPSAFSSSPAPAFGSSPAPAFGSSPFSSSAAASSTP
TFGSSLFGSAPASAAAPTTASSPSPFGFGSTGFGIGQPTSSSASTLFGAPAASAAATTPS
LFGSATTNPSPFGAPAASATATTPGLFGATSSTAVTPGLFGATPAAATTPSIFGATSSAA
STPSLFSTPATGFGFGSSASGATTATTAAPTPSFGFGLNSAAAPSSTAATSAPAPGFGPP
TGSALFGSTPAAPLFGNIAASSPATTATTAPSVGFSLPAATTASAPSFGFTPSSGSTTTG
STTPSLFSSAPSASAFSIPNNASAAPTTPASAPTSGFSLATSQAAPAPSLFSNTGAAASS
SASSLNFPFGASVATPTPTFASVSATSASTVPPTTVASTTSGSLFSVPASSSSSSGFSFT
VPPSSSSSAAVTTTITSPSTSAATTTAPSTTTSAFPSFSLQASTPASTSTLATQSALFGA
PATAASTSATSTTTSQATSSALQASSTGPTTTAITPAASQAPKLPSEIVGKCVEEIIRDW
NNGLQDRTAKFRKHATAISEWDRRILQNRNVLIRLEADVAKVVETQTSLERQLELIETHQ
REVDKALQSMEEEAEQIFQDERVLLREDEAASARDTMYEQAEIVENELQHMTEQVKSIIQ
TLNSTQGGELEATDSMTPFDVAVRILDNQLRSLMWIDEKANEFSNRIQRLPNNSAAAERD
SGIPRFWLN
NT seq 2190 nt   +upstreamnt  +downstreamnt
atggcctcctccttcgcgttcggcacttccggcgcagccggatccaccgcctcccctttc
tccttcaccaccgccccatccgccttctcctcttcccccgcccccgccttcggttcctcc
cctgctccggcgttcggatcctctccattctcctcctccgccgccgcttcctctactccc
acttttggttcatccctcttcggatccgcccccgcctctgcggccgctccgaccaccgct
tcctctccatccccattcggcttcgggtccactggcttcgggattggtcagcccacctcg
tcgtccgcctcaaccctcttcggcgcacccgccgcctccgccgcggcgaccactcctagc
ctattcggctccgctacaaccaatcccagccccttcggcgcaccagccgcctcagctacg
gcgactaccccgggcctatttggcgcgacctcctccaccgcggtcacgccaggtctcttc
ggcgcgacccccgccgccgccactacccccagtatattcggcgccacctcttccgctgcg
tccacgccaagccttttctctacacctgccacgggcttcggatttggctcatccgcgtca
ggcgccaccacggccacgaccgccgccccgacgccatcattcggcttcggtctcaacagc
gcggctgctccatctagtaccgccgctacctcggcaccggctccagggtttgggcccccc
accggttcggccttattcggatccacccccgctgcgccgctcttcggcaacatcgccgcc
tcgtctccagcaaccactgctacaaccgcgccatccgttgggttttcattaccggcagca
actaccgcctctgcaccgtcgttcggcttcacgccatcatcaggaagcacgacgacgggt
agcaccaccccttcattattctcgtctgctccctcagcctctgcattctcgatccctaac
aatgcatcggctgctcctaccacgccggcgtccgcccccaccagtgggttctccttggcc
acttcacaggcggcacctgctccctcattgttctctaataccggtgcagcagcaagctcc
tcagcaagctctcttaactttccattcggtgcatctgttgctactcccacgccgacattt
gcttctgtgtctgcaacgagtgcatccaccgtgccaccaactactgttgcctccacaaca
tcgggatcattgttctcggtgccagcatcatcttcttcctctagcggtttcagctttaca
gtaccaccatcatcttcatcatcagcagcagttaccaccactatcacaagtccgtcaaca
tctgcagccacaaccacagctccttcaaccacaacatctgcgtttcctagttttagcctg
caagcaagtacaccagcttctacctcaactttggcaactcagtcagcactgtttggtgct
cctgctacagctgcaagtacttcagccaccagcaccacaacaagtcaggcgacttcctca
gctcttcaagctagcagcactggacctactactactgctatcactccagcagcatctcag
gctcctaagcttccatcagaaattgttggtaaatgtgttgaggagattattcgggactgg
aacaatggtcttcaagaccgtactgcaaagttccggaagcatgccactgccatatctgaa
tgggacaggagaattctgcaaaataggaatgttcttataaggcttgaggctgacgtggct
aaggttgttgagacacaaacaagcttggagaggcaacttgagttgatagaaactcatcaa
agagaggtggacaaggctctacagagcatggaggaggaagccgaacagatattccaggat
gaacgggtgttacttcgtgaagatgaggctgcttctgcaagagatacaatgtacgagcaa
gctgaaattgtggagaatgaattgcaacatatgacagaacaagtaaaatccatcattcag
accttgaattctactcagggtggtgagctagaggctacagatagcatgacaccatttgat
gttgctgtccggatactggataatcaactgcgctctctaatgtggattgacgagaaggcc
aacgaattctcaaacagaatacagagactgcctaacaatagtgctgcagctgagcgcgac
tcaggaatcccaaggttttggttaaactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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