KEGG   Brachypodium distachyon (stiff brome): 100842360
Entry
100842360         CDS       T01717                                 
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100842360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100842360
   03110 Chaperones and folding catalysts [BR:bdi03110]
    100842360
   03029 Mitochondrial biogenesis [BR:bdi03029]
    100842360
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bdi04147]
    100842360
Enzymes [BR:bdi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     100842360
Messenger RNA biogenesis [BR:bdi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     100842360
Chaperones and folding catalysts [BR:bdi03110]
 Heat shock proteins
  HSP60 / Chaperonin
   100842360
Mitochondrial biogenesis [BR:bdi03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    100842360
Exosome [BR:bdi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100842360
  Exosomal proteins of other body fluids (saliva and urine)
   100842360
  Exosomal proteins of breast cancer cells
   100842360
  Exosomal proteins of colorectal cancer cells
   100842360
  Exosomal proteins of bladder cancer cells
   100842360
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 100842360
NCBI-ProteinID: XP_003574065
UniProt: I1HW10
Position
3:249314..253797
AA seq 598 aa
MASPFGGTSTCGLKAAAPAGFATKKQLSLVLPPCVSLPQKFRPRRKCSFRVNAAKELYFN
KDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVE
NIGAKLVRQAAAKTNDLAGDGTTTSVILAQGMITEGVKIVAAGANPVQIARGIEKTAKAL
VSELRKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRQGVVTLEEGKSAENNLY
VVEGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKINNARDLITILEDAIKSGYPIL
IIAEDIEQEALATLVVNRLRGALKIAAIKAPGFGERKSQYLDDIATLTGGTVIREEIGLS
LDKADSEVLGTAAKVLVTKDTTTIVGDGSTQEEVSKRVTQIKNQIEAAEQEYEKEKLNER
IAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDA
IKETLENDEQKIGAEIVRKSLSYPLKLIAKNAGVNGSVVTEKVLANDNFRYGYNAATGKY
EDLMAAGIIDPTKVVRCCLEHAASVAKTFITSDAVVVDIKEAEQAPAANPMAGSGYGF
NT seq 1797 nt   +upstreamnt  +downstreamnt
atggcttcaccattcgggggcacttccacatgtggcctcaaggccgccgctcctgctggc
ttcgcgaccaagaagcaactttcccttgttttgcccccgtgcgtttcgcttccccagaaa
ttcaggcccaggaggaagtgcagtttcagagtaaatgccgcaaaggagctctacttcaac
aaggatggatcagccatcaagaagctgcaaaatggagtcaataagcttgctgatctggta
ggagtcactcttggcccaaaaggacgcaatgttgtccttgagagcaagtatgggtcgccc
aaaattgtcaatgacggtgtcacggtggcaaaagaggttgagctggaggaccctgttgaa
aatattggagctaagttggttcggcaagctgctgctaagacaaatgatttggctggtgac
ggcacaaccacttctgttatccttgctcaaggaatgataactgagggtgttaagattgta
gctgctggtgctaatccggtgcagattgcccgtggtatcgagaaaacagccaaagcacta
gtcagcgaacttcggaagatgtccaaggaggttgaagatagcgaacttgctgatgttgct
gcagtaagtgctggaaataactatgaagttggcaacatgatagctgaggctatgagcaag
gttgggcggcagggtgtggtcacactcgaagaaggaaagagtgctgaaaacaacctctat
gttgttgaagggatgcagttcgatcgaggctatatttctccctacttcgtaactgacagt
gagaaaatgacagtggagtatgagaactgcaagctgcttcttgtggacaagaaaattaac
aatgccagagatcttatcactattctggaagacgcaatcaagagcggatatccaattctc
ataatcgcagaggatattgagcaggaagctcttgctacccttgtggtcaatcggcttaga
ggtgcattgaagattgctgccataaaagcccctggttttggagagcgcaagagtcaatac
ctggatgatattgctactctgacaggaggcactgtcatcagagaagaaattggactgtcc
ctggataaagcagacagcgaagtcctaggtactgctgccaaggttctagtgactaaggac
acaacgacaatagttggagatggtagtacgcaagaggaagtaagcaaaagggtgacacaa
atcaagaaccagattgaggctgctgaacaggaatatgagaaggaaaagctaaacgagagg
atagccaaactatctggtggagttgctgtcattcaggtgggagcacagactgaaactgag
cttaaggagaagaaactgagggttgaagacgcactgaatgcaacaaaggcggctgttgag
gaaggtattgttgtcggtggtggctgcacccttttaaggcttgcagcaaaagtcgatgcc
attaaagaaacccttgagaatgatgaacagaagattggtgctgaaatcgtaaggaagtcc
ttgagttacccccttaaattgattgcgaaaaatgctggtgttaacggcagcgttgttact
gaaaaggtccttgccaatgacaacttcaggtatggatacaatgccgctacaggaaagtac
gaggatttgatggctgctggtattattgaccccaccaaggtggtgaggtgttgcctggag
cacgccgcatcggtggcgaaaactttcatcacctcggacgccgtcgtcgtcgacatcaag
gaggcagagcaggcgcctgctgcaaacccgatggcaggttcaggttatgggttctaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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