KEGG   Brachypodium distachyon (stiff brome): 100844546
Entry
100844546         CDS       T01717                                 
Name
(RefSeq) eukaryotic initiation factor 4A
  KO
K03257  translation initiation factor 4A
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100844546
   03012 Translation factors [BR:bdi03012]
    100844546
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bdi04147]
    100844546
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     100844546
   mRNA cycle factors
    Stress granule specific factors
     100844546
Translation factors [BR:bdi03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    100844546
Exosome [BR:bdi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100844546
  Exosomal proteins of bladder cancer cells
   100844546
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 CMS1 DUF2780
Other DBs
NCBI-GeneID: 100844546
NCBI-ProteinID: XP_003563508
UniProt: I1GWP1
Position
1:complement(29871972..29875163)
AA seq 414 aa
MAGMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLR
PDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPV
RILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKM
RGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ
PENYLHRIGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVIEELPANVADLL
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggcaggaatggcaccagaaggttcccagtttgatgctaagaactatgattctaaaatg
caggagctgctgagccagggtgagactgaggagttcttcacatcctatgatgaagttcat
gagagctttgatgacatgggcctccaagagaaccttctcagaggaatttatgcttatggt
tttgagaagccttctgccatccagcagaggggaattgttcctttctgcaaggggcttgat
gttattcagcaagcacaatctggaacaggaaagactgctaccttctgctctggaatcctg
caacagcttgactatggtttggttgagtgccaggccttggtacttgctcccacccgtgag
cttgcgcagcagattgagaaggttatgcgtgcacttggtgactacttgggtgtgaaagtt
catgcatgtgttggaggaacttctgttcgtgaggatcaaagaattcttgcaagtggggtg
catgttgttgttggaacacctggtcgtgtcttcgacatgttgcgtaggcagtctctgcgc
cctgatcacatcaagatgtttgtcctggatgaagctgatgagatgctttcccgaggtttc
aaggatcagatttatgacatcttccagctgctccccggaaagattcaggttggagtcttc
tctgctacaatgccccctgaggcccttgagatcactcgtaagttcatgaacaagcctgtg
aggatccttgtgaagagggatgagcttacccttgagggtatcaagcagttctatgtcaat
gtggagaaggaagagtggaagctcgacacactctgtgacctgtacgagacccttgccatc
acccagagtgtcatctttgtgaacacccgccgcaaggtggactggctcactgataagatg
aggggcagggaccacacagtttctgccactcatggtgacatggaccaaaacactagggac
atcatcatgagggagttcagatctggttcttcccgtgtgctcattaccaccgacctgctt
gctcgtggtattgatgtgcagcaagtgtccctggtcatcaactatgatcttccgacccag
ccagagaactacctccatcgcatcggtcgtagtggtcgttttggtaggaagggtgttgcc
atcaactttgtgacccgtgaagatgagaggatgctgtttgacatccagaagttctacaac
gtggtgattgaagagctcccagccaacgttgctgacctcctgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (24)   

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