KEGG   Brachypodium distachyon (stiff brome): 100846111
Entry
100846111         CDS       T01717                                 
Name
(RefSeq) probable histone deacetylase 19
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03082  ATP-dependent chromatin remodeling
bdi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100846111
   03083 Polycomb repressive complex
    100846111
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bdi03036]
    100846111
Enzymes [BR:bdi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100846111
Chromosome and associated proteins [BR:bdi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     100846111
   HDAC complexes
    Sin3A-HDAC complex
     100846111
    BRAF-HDAC complex
     100846111
    REST complex
     100846111
    SHIP complex
     100846111
    MiDAC complex
     100846111
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     100846111
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100846111
  Chromatin remodeling factors
   NuRD complex
    100846111
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 100846111
NCBI-ProteinID: XP_003571679
UniProt: I1HYR0
Position
3:6277070..6283299
AA seq 518 aa
MDLSSAGSGGNSLPSVGPDGQKRRVCYFYDPEVGNYYYGQGHPMKPHRIRMTHSLLAQYG
LLDQMQVLRPHPARDRDLCRFHADDYISFLRSVTPETQQDQIRALKRFNVGEDCPVFDGL
YSFCQTYAGASVGSAVKLNRGHDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHH
QRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDVRDIGHSKGKYYSLNVP
LDDGIDDESYQSLFKPIMAKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKY
MRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQELEDKMPINEYYEYFGPDYTLHVAP
SNMENKNTHHQLDDIRSKLLDNLSKLQHAPSVQFQERPPDTELPEADEDQEDQDERHDPD
SDMELDYHTSLEDPARRSNIQGTRVKREFAGTETKDQDGNRVTAEHRGPEPMAEDIGPSK
QVPPVDANAMAVDEPGNVKTEPGSSTKLPDPSAVYQKP
NT seq 1557 nt   +upstreamnt  +downstreamnt
atggacctctcctcggccggctccggcggcaactcgctgccgtcggtcggccccgacggg
cagaagcggcgggtgtgctacttctacgacccggaggtgggcaactactactacgggcag
gggcacccgatgaagccgcaccgcatccgcatgacgcactcgctgctggcccagtacggc
ctcctcgaccagatgcaggtgctgcggccgcaccctgcccgcgaccgcgacctctgccgc
ttccacgccgacgactacatctccttcctccgctccgtcacgcccgagacgcaacaggac
cagatccgggccctcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggcctc
tacagcttctgccagacctacgcgggggcctccgtcggcagcgccgtcaagctcaaccgc
ggccacgacatcgccatcaactggtcagggggcctgcaccacgcgaagaagtgcgaggcg
tccgggttctgctacgtcaacgacatcgtcctcgccatcctcgagctactcaagcatcac
cagcgggttctatatgttgatattgatattcaccatggggatggagttgaggaggcgttc
tacacaactgatagggtcatgacagtttcattccacaagtttggggattatttccctggc
acaggggatgtccgtgatattggccattcaaaggggaagtattactccctgaatgttcct
ctggacgatgggattgatgacgaaagctaccagtccctgtttaagccaataatggccaaa
gttatggaggttttccgccctggtgcagttgtgcttcagtgtggtgctgattcgttatct
ggtgataggttgggttgcttcaacctttcaatcagaggtcatgcagaatgtgtgaagtac
atgaggtctttcaacgttccattgttgcttcttggcggtggtggatataccataagaaat
gttgcacgttgttggtgttatgagacaggagttgcactaggtcaagagcttgaggataaa
atgcctataaatgagtactacgaatactttggtccagattacactcttcatgttgcacca
agtaacatggagaacaaaaatacacaccatcaactggatgatataaggagcaaacttctt
gataatctttcaaaacttcaacatgctcctagtgtccaatttcaagagcggcctcctgat
acagagttacctgaggcggatgaagatcaagaggatcaggatgaaaggcatgaccctgat
tctgatatggaattggattatcacacatctttggaagacccagcaaggaggagcaatatt
caaggtacaagagttaagagagaatttgctggaacagaaaccaaagatcaggatggtaac
agagtaacagctgaacatagaggaccagaaccaatggcagaggacattggtccctcgaag
caagtccctccggtcgatgcaaatgcgatggctgtggatgagccaggaaatgtcaagaca
gaaccagggagctctaccaaattgccagacccatcggctgtttatcagaagccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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