KEGG   Burkholderia dolosa: AK34_792
Entry
AK34_792          CDS       T03793                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
bdl  Burkholderia dolosa
Pathway
bdl03030  DNA replication
bdl03430  Mismatch repair
bdl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bdl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AK34_792 (dnaE)
   03430 Mismatch repair
    AK34_792 (dnaE)
   03440 Homologous recombination
    AK34_792 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bdl03032]
    AK34_792 (dnaE)
   03400 DNA repair and recombination proteins [BR:bdl03400]
    AK34_792 (dnaE)
Enzymes [BR:bdl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AK34_792 (dnaE)
DNA replication proteins [BR:bdl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AK34_792 (dnaE)
DNA repair and recombination proteins [BR:bdl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AK34_792 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C RecG_wedge
Other DBs
NCBI-ProteinID: AJY12815
Position
1:852551..856084
AA seq 1177 aa
MSDPRFVHLRVHSEFSIADGIVRLDDIVKAAAADGQGALALTDLGNAFGLVRFYQEARGK
GIKPIAGCDVWIANPDDRDKPSRLLLLVKDKRGYLNLCELLSKAWLTNQYRGRAELDASW
LEGELSQGLLALSGAQQGDIGLALAAGNEEAARRHAERWAKVFPGGFYIELQRYGQPGAE
AYIQQAASLAASLRLPVVATHPTQFMTADDFTAHEARVCISEGDILANPRRQKRFTTEQY
FRTQDEMVALFADLPSAIANTVEIAKRCNLKLELGKPKLPLFPTPDGMSLDDYLVQLSRE
GLEKRLAQLYPDEAERDAQRDTYYKRLEFECGTITKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIADAMK
EEPQLQERYDNEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDDGG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKADWSLSQVPLDDPASFQ
ILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VDYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHRE
IFAEGAAKNGLSREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCIANNLVVLPPDINLSHYRFEPVAEADGKRSRTIRYGLGAVK
GSGQNAIEEILRARDEKPFTDLFDFCERIDRRIVNRRTIEALIRAGAFDSLNANRAQLLA
SVPLAMEAADQAEANALQAGLFDMGAESPHAHALVDEPAWDDKRRLQEEKGALGFYLSGH
LFDAYRDEVRRFVRQKIGDLKEGRDKLVAGIIASLRTQMTQRGKMLIALLDDGTGQCEIT
IFNEQFEANKALFKEDELLIVQGQARNDAFTGGIRFTADTVMDLERARSRYAQAVRLTMN
GNADAAVLRRVLEPHVSKHDPAAAHAMDAPAPRGGGRDGGRRQQAPLPNGLAVQIHYSNA
RAQGEMRLGDAWRVKPSDALLAELRATFGGSTVEIAY
NT seq 3534 nt   +upstreamnt  +downstreamnt
atgtcagatccccgcttcgtccatcttcgcgttcactccgaattctcgattgccgacggc
atcgtgcgtctcgacgacatcgtcaaggcggcggccgcagacggccagggcgcgctcgcc
ctcaccgatctcggcaacgcgttcggcctcgttcgtttctatcaggaagcccgcggcaaa
ggcatcaagccgatcgccgggtgcgacgtctggatcgccaatccggacgaccgcgacaag
ccgtcgcggctgctgctgctcgtcaaggacaagcgcggctacctgaacctgtgcgaactg
ctgtcgaaggcatggctgacgaaccagtatcgcggccgcgccgagctcgacgcgagctgg
ctcgaaggagaactgtcgcaggggctgctcgcgctgtcgggcgcgcagcagggcgacatc
gggctcgcgctcgcggcgggcaacgaggaggctgcgcgccgccacgccgagcgctgggcg
aaggtatttccgggcggcttctacatcgagctgcagcgttacggtcagccgggcgccgag
gcgtatatccagcaggcggcgtcgctcgccgcgtcgctgaggctgccggtcgtcgcgacg
catccgacgcagttcatgactgcggacgacttcaccgcgcacgaggcgcgcgtgtgcatt
tccgaaggcgacatcctcgcgaacccgcggcgccagaagcgcttcacgaccgagcagtac
ttccgcacgcaggacgagatggtcgcgctgttcgcggatctgccgtccgcgatcgcgaac
acggtcgagatcgcgaagcgctgcaatctgaagctcgagctcggcaagccgaagctgccg
ctgttcccgacgccggacggcatgtcgctcgacgactatctcgttcagctgtcgcgcgaa
gggctcgagaagcgcctcgcgcagctgtatccggacgaagccgaacgcgacgcgcagcgc
gacacgtactacaagcggctcgaattcgagtgcgggaccatcacgaagatgggctttccc
ggctacttcctgatcgttgcggacttcatcaactgggcgaagaacaacggcgtgccggtc
gggccgggccgcggctcgggcgccggttcgctggtcgcgtacgcgctcggcatcaccgat
ctcgatccgctgcgctacaacctgctgttcgagcgcttcctgaatccggaacgcgtgtcg
atgcccgacttcgacatcgacttctgccagcacggccgcgaccgcgtgatccagtacgtg
aaggagaagtacggcgcggacgccgtgtcgcagatcgccacgttcggcacgatggccgcg
aaggcggccgtgcgcgacatcgggcgcgtgctcgatctcggctacatgttcaccgacggc
gtcgcgaagctgattccgttcaagcccggcaagcacgtgacgatcgccgacgcgatgaag
gaagagccgcagctgcaggagcgctacgacaacgaggacgaagtccatcagctgctcgac
cttgcgcagcgcgtcgagggcctcacgcgcaacgtcgggatgcacgcgggcggcgtgctg
atcgcgccgggcaagctgaccgacttctgcccgctgtacacgcagggcgacgacggcggc
gtcgtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaagttcgacttt
ctcggcctcacgacgctgacgatcctcgactgggccgagcgctacatccgccgtctcgat
ccgtcgaaggccgactggtcgctgtcgcaggtgccgctcgacgatccggcatcgttccag
atcctgaagaaggcgaacacggttgccgtgttccagttggaaagccgcgggatgcagggg
atgctgaaggatgcgcagcccgaccgcttcgaggacatcatcgcgctcgtgtcgttgtac
cgtccgggcccgatggatctgatcccgagcttctgcgcgcgcaagcacgggcgcgagaag
gtcgattatccggatccgcgcgtcgaacccgtcctgaaagagacctacggaatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctcggcggcgcg
gacttgctgcgtcgcgcgatgggcaagaagaagcccgaggagatggccaagcaccgcgag
atcttcgccgagggcgcggcgaagaacgggctgtcgcgcgagaagtccgacgagatcttc
gacctgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggccgcgtatgcg
ctgctcgcgtactacaccgcgtggctgaaggcgcatcatccggccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgattgcatc
gcgaacaacctcgtcgtgctgccgccggacatcaacctttcgcattaccggttcgagccg
gtcgccgaagccgacggcaagcgttcgcgcacgatccgctacggcctcggcgccgtgaag
ggcagcggccagaacgcgatcgaggaaatcctgcgcgcgcgcgacgaaaagccgttcacc
gatctgttcgatttctgcgagcggatcgaccgccgcatcgtcaatcgccgcacgatcgaa
gcgctgatccgcgcgggcgcgttcgattcgctgaacgcgaaccgcgcgcaactgctcgcg
tcggtgccgctcgcgatggaggcggccgatcaggccgaagcgaacgcactgcaggccggc
ctgttcgacatgggcgcggagtcgccgcacgcgcacgcgctcgtcgacgagccggcgtgg
gacgacaagcggcgtctgcaggaggagaagggcgcgctcggcttctatctgtccggtcac
ctgttcgacgcgtatcgcgacgaggtgcgccgcttcgtgcgccagaagatcggcgatctg
aaggaagggcgcgacaagctcgtcgccgggatcatcgcgtcgctgcgtacgcagatgact
cagcgcggcaagatgctgatcgcgctgctcgacgacggcaccggccagtgcgagatcacg
attttcaacgagcagttcgaggccaacaaggcgctgttcaaggaagacgagctgctgatc
gtgcagggccaggcgcgcaacgacgcattcacgggcggcatccgctttaccgccgacacc
gtgatggatctcgaacgcgcgcgcagccgctacgcgcaggcggtgcggctgacgatgaac
ggtaacgcggacgcggcggtgctgcgccgcgtgctcgagccgcacgtgtcgaagcacgac
cctgccgcggcgcacgcgatggacgcgccggcgccgcgcggcggcggacgcgacggcggc
cgtcgccagcaggcgccgttgccgaacgggctcgcggtgcagatccactacagcaacgca
cgcgcgcagggcgagatgcggctgggcgatgcgtggcgcgtgaagccgagcgatgcgttg
ctcgcggagctgcgtgcgaccttcggcggcagtaccgtcgaaatcgcgtattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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