KEGG   Burkholderia dolosa: AK34_906
Entry
AK34_906          CDS       T03793                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
bdl  Burkholderia dolosa
Pathway
bdl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bdl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AK34_906 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bdl03400]
    AK34_906 (uvrB)
DNA repair and recombination proteins [BR:bdl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AK34_906 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AK34_906 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII DEAD UVR AAA_30 AAA_16 UB2H Kinesin FlaG AAA_22
Other DBs
NCBI-ProteinID: AJY13993
Position
1:968761..970851
AA seq 696 aa
MSEHHAEVGDALDESKFVTFEGSPFQLYQPYPPAGDQPTAIDTLVEGVHDGLSFQTLLGV
TGSGKTFTMANTIARLGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEA
YVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMILT
LRSGDKLGQREVIARLIAMQYTRNEQDFQRGTFRVRGDTIDIFPAEHAEMAVRVELFDDE
VETLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRDTVMRAVETIKEELRERLEFFHREGKL
VEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPPDAVMFLDES
HVLIGQLNGMYNGDRARKENLVNYGFRLPSALDNRPLKFHEFERKMRQVVFVSATPADYE
QRVTGQIAEQVVRPTGLVDPEIEVRPASTQVDDVLTEINARVTAGERVLITVLTKRMAEQ
LTEFLADHGIKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNVNGKAILYADTMTESMKRAIGETERRRAKQIAYNEK
MGITPRGVVKRIKDIIDGVYNPDDARAELKEAQQRAKFEDMSEKQIAKEIKRLEKQMADY
AKNLEFEKAAATRDQLALLRERVFGANVGDHVDTGR
NT seq 2091 nt   +upstreamnt  +downstreamnt
atgtccgaacatcatgccgaagtcggcgacgcgctcgacgaatcgaaattcgtgaccttc
gaagggtccccgttccagctgtatcaaccgtatccgcccgcaggggatcagccgaccgcg
atcgacacgctcgtcgagggcgtccacgacggcctgtccttccagacgctcctcggcgtg
accggttcgggcaagactttcacgatggcgaacaccatcgcgcggctcggccggccggcg
atcgtgttcgcaccgaacaagacgctcgccgcgcagctctatgcggagttccgggagttc
ttcccgcgcaacgcagtcgagtatttcgtgtcgtactacgactactaccagcctgaggcc
tacgtgccgcagcgcgacctgttcatcgagaaggattcgtcgatcaacgagcacatcgag
cagatgcgactgtcggcgacgaagagcctgatggagcgtcgcgacgtggtgatcgtcgcg
acggtgtcggcgatctacggtatcggcaacccgtccgaataccaccagatgatcctgacg
ctgcgcagcggcgacaagctcggccagcgcgaagtgatcgcgcggctgatcgcgatgcag
tacacgcgcaacgaacaggacttccagcgcggcacgttccgcgtgcgcggcgacacgatc
gacatcttcccggccgaacatgcggagatggccgtgcgcgtggagctgttcgacgacgag
gtcgagacgctgcagctgttcgatccgctgaccggccgcgtgcggcagaagatcccgcgc
tttaccgtgtatccgtcgtcgcactacgtgacgccgcgcgacacggtgatgcgcgcggtc
gagacgatcaaggaggaactgcgcgagcggctcgaattcttccatcgcgaaggcaagctc
gtcgaagcgcagcgtctcgagcagcgcacgcgattcgacctcgagatgttgcaggagctc
ggcttctgcaagggcatcgagaactactcgaggcacttttccggtgccgcgcccggtgaa
ccgccgccgacgctcgtcgactacctgccgcccgatgcagtgatgttcctcgacgagtcg
catgtgctgatcggccagctgaacggcatgtacaacggcgaccgcgcgcgcaaggaaaac
ctcgtgaattacgggttccggctgccgtcggcgctcgacaaccggccgctcaagttccac
gagttcgagcgcaagatgcgtcaggtggtgtttgtgtcggcgacgcctgctgactacgag
cagcgcgtgaccggacagatcgccgagcaggtcgtacggcccacggggctcgtcgatccc
gagatcgaagtgcggccggccagcacgcaggtcgacgacgtgctgaccgagatcaacgcg
cgcgtgacggccggcgagcgcgtgctgatcaccgtgctgacgaaacggatggccgagcag
ctcaccgagtttctggccgaccacggcatcaaggtgcgctatctgcacagcgacatcgac
acggtcgagcgtgtcgagatcattcgcgatctgcggctcggtacgttcgacgtgctggtc
ggcatcaacctgctgcgcgaggggctcgacattcccgaggtgtcgctggtcgcgatcctc
gatgcggacaaggaaggtttcctgcgcgccgagcgttcgctgatccagacgatcgggcgc
gctgcacgaaacgtgaacggcaaggcgattctctatgccgacacgatgacggagtcgatg
aagcgcgcgatcggcgagaccgagcgacgtcgcgcgaaacagatcgcgtacaacgagaag
atgggcatcacgccgcgcggcgtcgtgaagcgcatcaaggacatcatcgacggcgtctac
aacccggacgacgcgcgtgcggaactgaaggaggcgcagcagcgcgcgaaattcgaggac
atgtcggaaaagcagatcgcgaaggaaatcaagcgcctcgaaaagcagatggccgactac
gcgaagaacctcgagttcgaaaaagcggcggcgacccgcgatcagctcgcgctgctgcgc
gagcgcgtgttcggcgcgaacgtcggcgaccacgtcgacactggacgataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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