KEGG   Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_1123
Entry
BBDE_1123         CDS       T04222                                 
Name
(GenBank) holliday junction resolvase
  KO
K01159  crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
Organism
bdn  Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bdn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BBDE_1123
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bdn03400]
    BBDE_1123
Enzymes [BR:bdn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.10  crossover junction endodeoxyribonuclease
     BBDE_1123
DNA repair and recombination proteins [BR:bdn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BBDE_1123
    RecFOR pathway proteins
     BBDE_1123
SSDB
Motif
Pfam: RuvC
Other DBs
NCBI-ProteinID: BAQ27117
Position
complement(1323457..1324038)
AA seq 193 aa
MIILGVDPGLTRCGVGVIEAGAYRRLSFIHVDVVRSDPKMSQDLRLLAIYNGLVEKIERF
APDTVSIERVFAQENRNTVLGTAQAAGLAMLAAAQRGIPVALHTPTESKMAITGNGKAEK
IQMERMVARMLGLNTLPKPADAADALAIAICHALRPAGALQGGEREQHLTDAQRQWAKAA
QKAAHRQGVRRGM
NT seq 582 nt   +upstreamnt  +downstreamnt
gtgattattcttggcgtcgaccccggactgacacggtgcggggtcggcgtgatcgaagcc
ggcgcgtaccgccggctttcgtttattcacgtggatgtcgtacgttccgacccgaagatg
tcacaggatctgcgtctgttggccatttacaatggtctggtcgagaagatcgaacgcttc
gccccggatacggtatccatcgaacgtgtgttcgcgcaggagaaccgcaataccgtgctc
ggcacggcacaggcggcaggcctcgcaatgttggcagccgcacagcggggcattcccgtg
gcattgcatacgccaaccgaatcgaagatggccatcaccggcaacggcaaagccgagaaa
attcagatggaacgcatggtcgcacgcatgttgggactgaataccctgcccaagccggct
gacgccgcggatgcgttggccattgccatttgccacgcactacgcccggcaggcgccttg
caaggcggtgaacgcgagcaacacctgactgacgcgcaacgacagtgggccaaggccgcc
cagaaggccgcccataggcaaggcgtccgtagaggcatgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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