KEGG   Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_1607
Entry
BBDE_1607         CDS       T04222                                 
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
bdn  Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bdn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    BBDE_1607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bdn03400]
    BBDE_1607
Enzymes [BR:bdn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     BBDE_1607
DNA repair and recombination proteins [BR:bdn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     BBDE_1607
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon Peptidase_S66
Other DBs
NCBI-ProteinID: BAQ27601
Position
1915344..1916516
AA seq 390 aa
MAVERWPSVWVAGQITQINTRRAGSAYLTLRDDYQDIAMEVNGFGQFAAAATPFVQGDRV
IIHGKPNLWMKRTSLSLRGDAIIAAGAGGSLKAMIDELRKKLKGEGLFDIDRKMPLPEFP
HCIGLICAPQARAEGDVITNVRLRWPVANFKVMHVHVQGEQCPSDVVAAIRAMDADPDVD
VIIVARGGGAFEDLIGFSDEGVVRAAAAAQTPLISAIGHEDDWTLLDLVADLRASTPTDA
AKKVVPDVNEQTQLINVHLQRMRMRIDATIANEMRLVEGYANRPSLTQPLTMLEPHQRFL
DDARSRMRIGLTRILDDASLTIERSRASLTALSPQSTLNRGYAVIQSADGHVIDDANNVK
PGDELTMTLKHGMVVSEVKTATTARSQHDQ
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggccgtcgagcgttggccttccgtatgggtggccgggcagatcacacagatcaacacc
cgccgtgcgggcagcgcctatctcaccctgcgcgacgattatcaggacatcgcgatggaa
gtcaatggcttcggccaattcgcggcggccgccacgccgtttgtgcagggcgatcgtgtg
atcatccacggcaagccgaatctgtggatgaaacgcacgtcgctttcgctcagaggtgac
gcaatcatcgcagccggcgcaggcggcagtctgaaggcgatgatcgacgagctgcgcaaa
aagctcaaaggcgaaggcctgtttgatatcgaccgcaaaatgccgcttccggaattcccg
cattgcatcggcctgatctgcgcccctcaggcacgtgcggaaggcgatgtgatcaccaac
gtacgcctgcgctggccggtagcgaatttcaaggtgatgcacgtacacgtgcaaggcgag
caatgcccgtccgacgtggtcgccgccatccgtgcgatggatgccgacccggatgtcgac
gtaatcatcgtcgccaggggcggcggcgccttcgaagatctcatcggattctccgacgaa
ggtgtggtgcgagccgccgcggcggcacagacccctttgatctcggccatcggacatgag
gatgactggaccctgctcgacctggtagccgacctgcgcgcctccacccccaccgacgcc
gccaagaaagtggtgcctgacgtcaatgagcagacacaactgatcaacgtgcatctgcaa
cgcatgcgcatgcgcatcgacgcgacgatcgccaacgagatgcgactggtcgaaggctac
gcgaacaggccaagcctgacacagccgctgaccatgctggaaccgcatcaacggttcctc
gatgacgcccggagccgtatgcgcatcggactgacccgcattctcgacgacgccagcctg
accatcgaacgctcacgcgcatccctgacggccctcagcccgcaatccaccctcaaccgc
ggctatgcggtaatccaaagcgccgacgggcatgtgatcgacgacgcgaacaacgtcaaa
cccggggacgagctcaccatgaccctgaagcacggcatggtcgtctccgaagtcaaaacc
gcgactacagcaaggagtcaacatgaccagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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