KEGG   Phocaeicola dorei HS1_L_1_B_010: EL88_07530
Entry
EL88_07530        CDS       T03262                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bdo  Phocaeicola dorei HS1_L_1_B_010
Pathway
bdo03030  DNA replication
bdo03430  Mismatch repair
bdo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bdo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EL88_07530
   03430 Mismatch repair
    EL88_07530
   03440 Homologous recombination
    EL88_07530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bdo03032]
    EL88_07530
   03400 DNA repair and recombination proteins [BR:bdo03400]
    EL88_07530
Enzymes [BR:bdo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EL88_07530
DNA replication proteins [BR:bdo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EL88_07530
DNA repair and recombination proteins [BR:bdo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EL88_07530
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2
Other DBs
NCBI-ProteinID: AII63027
Position
complement(1714960..1715736)
AA seq 258 aa
MKLNLKNPIVFFDLETTGTNINTDRIVEICYLKVYPNGNEETKTMRINPEMHIPEQSSAI
HGIYDADVADCPTFKEVAKEIARDIEGCDLAGFNSNRFDIPVLAEEFLRAGVDIDMMKRK
FIDVQVIYHKLEQRTLSAAYKFYCGKNLEDAHTAEADTRATYEVLKSQLDRYPEELQNDM
AFLAEYSSFNKNVDFAGRIVYDDKGVEVFNFGKYKGMSVSEVLQKDPGYYSWILNGDFTL
NTKNVLTKIRLRESGMMK
NT seq 777 nt   +upstreamnt  +downstreamnt
atgaaattgaacttgaagaatcctattgtttttttcgatttggaaacaacgggaacaaat
ataaacacagacagaatagtggaaatatgctatctgaaggtgtatccaaacggcaacgaa
gaaacgaagaccatgcgtatcaatccggaaatgcacattcccgaacaatcctctgctatc
cacggtatttatgacgcagatgtggcagactgccctaccttcaaggaagtggcaaaagag
atagcccgggacattgagggatgtgacctggccggtttcaattccaatcgtttcgacatt
ccggttttggctgaggagttcctgcgcgcaggagtagacattgacatgatgaaacgaaaa
ttcattgacgtgcaggtaatttatcacaaactggaacagcgtaccctgtctgccgcctat
aaattctattgcggcaagaatctggaagatgcccatacagccgaagccgacacacgcgcc
acatacgaagtactgaaatcccaattggaccgctatccggaagaactgcaaaatgatatg
gcatttctagccgaatactcaagtttcaacaagaatgtagatttcgccggacgcattgtt
tatgatgacaaaggcgtggaagtatttaattttgggaaatacaaaggaatgtctgtcagc
gaagtgttacaaaaagatccgggctactacagctggatactgaacggtgattttacgctg
aacacgaaaaacgtactgacaaaaatcagactacgtgaatcgggaatgatgaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system