KEGG   Phocaeicola dorei HS1_L_1_B_010: EL88_18190
Entry
EL88_18190        CDS       T03262                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03169  DNA topoisomerase III [EC:5.6.2.1]
Organism
bdo  Phocaeicola dorei HS1_L_1_B_010
Brite
KEGG Orthology (KO) [BR:bdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bdo03032]
    EL88_18190
Enzymes [BR:bdo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     EL88_18190
DNA replication proteins [BR:bdo03032]
 Prokaryotic type
  DNA Topoisomerases
   EL88_18190
SSDB
Motif
Pfam: Topoisom_bac Toprim Octopine_DH
Other DBs
NCBI-ProteinID: AII64959
Position
4015141..4016925
AA seq 594 aa
MIAILTDKPSVGKEIGRIIGATKVRNGYVEGNGYMVTWTFGNMLSLAMPKDYGTQKLERN
DFPFIPSEFELMVRHTRTENGWIPEIDAVLQLKVIEKVFQACDTIIAATDASRDGEMTFR
YVYQYLNCTQPCFRLWISSLTDESVRQGMENLKPDSCYDSLFLAADSRNKADWILGINAS
YAMCKAMGFGNNSLGRVQTPVLAVISRRYRERENHISSDSWPIYISLQKDGILFKMRRTQ
DIPDKKSATMFFQDCKLAHQAQITGIRHSIKEILPPDLLDLTQLQKEANIRYGFTASEVY
DIAQSLYEKKLISYPRTSSRYLTEDVFDSLPPIMARLLSWELFPAAKGTASIDISSLFRH
VINAEKANVHHAIIITGIRPGNLPEKEMLVYRLVAGRMLEAFMPPCRIETTDIEAICAAQ
HFKAEQTRIIEAGWHDVFMNSDMIPKSGYSVNELPEVEKGDTLNVCGRNLVHKKQLPVNP
FTDAELVEYMELNGLGTVSSRTNIIRTLVNRKYIRYSGKYIVPTPKGMFTYETIRGKKIA
DTSLTADWEKQLAGLESGMITRQDFLNRIRTLAKEMTDDIFNTYSQKEKVSILK
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgattgccatattaacagacaaaccaagtgtaggaaaagaaatcggaagaatcatcggt
gcaaccaaagtaagaaacggatatgtggaaggaaacggctacatggttacgtggactttc
gggaacatgctgtcactggccatgccgaaggactacggaacccagaagctagaacgaaac
gattttcctttcatcccgtccgaatttgagctaatggtacgtcatacacgcactgagaac
ggatggataccggagattgatgccgtactccagcttaaagtaatcgaaaaagtgttccag
gcatgtgacaccatcattgcggctaccgatgccagccgtgacggggaaatgacattccgc
tatgtctatcaatacctaaactgtacacagccttgtttccgtctgtggatttcctctctc
accgacgaatctgtacgtcaaggtatggaaaatctgaaaccagacagttgttacgacagc
ctgttccttgctgccgacagccgcaacaaggcggactggattctcggaatcaacgccagc
tatgccatgtgcaaggcgatgggattcggcaacaattccctcggacgggtgcagacaccg
gtactggccgtcatcagcagacgctaccgtgaaagggagaaccatatttcatcggacagc
tggcccatctacatcagcctgcaaaaggacggcatccttttcaagatgcgccgcacacag
gatattcccgacaaaaaatccgctacaatgttttttcaggactgcaagctggcacatcag
gcacagattaccggtatccgtcacagtattaaggaaatacttccaccggatctgcttgac
ctgacacaacttcagaaggaagcgaacatccgctatggttttaccgcatcagaggtgtac
gacatcgcacagtctctttatgaaaagaaactgatttcctatccaaggacttccagccgt
tatctgacggaggatgtgtttgactcgcttccaccaatcatggcgcgtctgctttcatgg
gagctgttccctgccgctaaaggaactgcaagtattgacatatccagtctattccgccac
gtaataaacgcagaaaaggccaatgtacatcatgccatcatcattacaggtatccgtccc
gggaatctgcccgaaaaggaaatgctggtctataggcttgttgccggaagaatgcttgaa
gcattcatgcctccgtgccgcatagaaacgactgacattgaggctatatgcgccgcacag
catttcaaggccgaacaaacaagaatcattgaagccggctggcatgacgtgttcatgaat
tctgacatgattccaaaatcgggatattccgtcaatgaactccccgaagtggagaaaggt
gataccttgaatgtatgcggacgcaacctggtacacaagaaacagctaccggtaaatccg
ttcacggatgcagagttggtggaatatatggaactgaacggactgggcacggtatcatca
cgtaccaatatcatccgtacactagttaaccgtaaatatatccgttattcagggaaatat
atcgttccgaccccgaaaggtatgttcacctacgaaactatccgtggaaagaaaattgcg
gatacttcacttaccgcagactgggaaaaacagctggccggacttgaaagcggaatgata
accagacaggacttcctaaataggatcagaactctcgccaaggaaatgaccgatgacatt
ttcaacacctattcccaaaaagaaaaagtatctatactaaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system