KEGG   Bdellovibrio sp. ZAP7: DOM22_12425
Entry
DOM22_12425       CDS       T06441                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
bdz  Bdellovibrio sp. ZAP7
Pathway
bdz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bdz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DOM22_12425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bdz03400]
    DOM22_12425
DNA repair and recombination proteins [BR:bdz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DOM22_12425
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 UVR HHH_2 Topoisom_I
Other DBs
NCBI-ProteinID: QDK45898
UniProt: A0A514XJI2
Position
complement(2525982..2527871)
AA seq 629 aa
MASSKFEEIRDKVREFPTQSGVYLMKGPGDKIIYIGKAKSLRNRVRSYFTDSKDHSPKTR
LLVSNILEVEYILTKTEVEAFLLEASLIKKHRPKYNIRLRDDKAYPYIRLSWSEKFPRLF
VARKVKRDGSLYFGPYTSGLAVQGTIRFLNRTFKIRDCTDAMFNTRKRPCMTYQIGRCTA
PCVEYISQEEYKGEVEGAKLFLKGQNKKVIKALKEKMMGAADEEKFEVAARLRDSIEAIK
TILEKQSVINDTTEKDQDAVGYYGDERGCLIETVHVRAGRVIGTRPHFLPHFDPNDPVED
PREWMVDFLNQYYEDNFIPDDVLLPLDIGSDLNKLMEQVLESRSETKSTVRFATDERGRN
LVEMANENAKAHFLKYVSKSEEKLRGLQEIKEKFNLPEMPRRIECYDISTFQGAETVASQ
VVFEEGVPAKDHYRRYKIRTVEGINDFASMYEVLSRRFKHTEYEDPQLIVIDGGKGQLSQ
AIKILTEIGRNDIPVVGLAKARTESDFQKAEVESTDERFFLPGRANPVIFKNNSEAQHIL
VGIRDEAHRFAITYHRKLREGTSLESELDYVVGLGEKRKKTLLTQFNSIDEIRMADPSEI
AKLKSFNRVLAERIILQLNESEEVEVEAE
NT seq 1890 nt   +upstreamnt  +downstreamnt
atggcctcgagtaagttcgaagaaatacgcgataaggtgcgcgaattccccacgcaaagt
ggcgtgtacctgatgaaaggacctggcgataagattatctatatcgggaaagccaagtcc
ttgcgcaatcgcgttcgaagttactttacggacagcaaagatcactctccaaaaaccaga
cttctggtttccaatattctggaagtcgaatacattttaaccaaaaccgaggttgaagca
tttttgctggaagcctcgctgattaaaaagcatcgtcccaaatacaatatccgactgcgt
gacgataaggcctatccttacattcgcctcagttggtccgagaaatttcctcgtctgttt
gttgctcgtaaagtgaagcgcgatggcagtctttattttgggccttatacgtcgggattg
gctgtgcaggggaccattcgtttcttgaaccgcacttttaaaattcgtgattgtacagat
gctatgttcaacacccgcaaacgcccttgtatgacgtaccagattggtcgttgtacggct
ccgtgcgtggaatatatctctcaagaagagtataaaggtgaagttgaaggcgcgaagcta
ttcctgaaaggccagaacaaaaaggtcattaaagccttaaaagaaaaaatgatgggtgca
gccgacgaagaaaaattcgaagtggccgcgcgcctgcgtgattcgatcgaagccatcaaa
acgattcttgaaaaacaatcagtcatcaatgataccactgaaaaagatcaggatgccgtg
ggctattacggagatgaacgtggctgcttgattgaaacagttcacgtgcgcgcaggtcgt
gtgatcggaacacgtcctcacttcttgccgcattttgatccgaatgatccagtggaagat
ccgcgcgagtggatggtggacttcctgaatcagtattacgaagacaacttcatcccggat
gacgtcttattgccgttggatattggcagtgacttgaataagctgatggagcaggttttg
gaatcgcgttctgaaacgaaatccacagtccgttttgctacggatgagcgcggtcgaaat
ttggtggaaatggccaatgaaaacgccaaagctcatttcttaaaatatgtttcaaaatcc
gaagagaaactccgtggtctgcaggagattaaagagaaattcaatcttccggaaatgcct
cgtcgtatcgagtgttatgatatttcgaccttccagggtgcggagactgtcgcctcccaa
gtggtttttgaagaaggtgttcctgctaaggatcactatcgccgctataaaatcagaaca
gttgaaggcatcaatgactttgcctccatgtacgaggttttaagtcgcagatttaagcac
acggaatacgaagacccgcagttgatcgttatcgacggtggtaaagggcagttgtcccaa
gccatcaagattttaactgaaatcgggcgaaatgacattccggtagtaggtttagccaag
gctcgtactgaaagtgacttccaaaaggcggaagttgagtccacggatgaacgtttcttt
ctgccgggccgtgcaaatccggtgattttcaagaacaactccgaagctcagcacatttta
gtgggcattcgtgacgaggcccatcgttttgccatcacttatcaccgtaagttacgcgaa
ggaacgtctttagagagcgaattggattacgttgtgggcttaggcgaaaaaagaaagaaa
actcttttgactcagtttaactctattgatgaaatcagaatggccgatcccagtgagatt
gcgaaactaaaaagctttaaccgcgttttggctgagcgaattattttgcaattgaatgaa
tcggaagaagtagaagtcgaagcagaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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