KEGG T06159: NCTC12898

Bartonella elizabethae: NCTC12898_00072

Entry

NCTC12898_00072   CDS       T06159

Symbol

rsmB_1

Name

(GenBank) Ribosomal RNA small subunit methyltransferase B

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

bez Bartonella elizabethae

Brite

KEGG Orthology (KO) [BR:bez00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bez03009]
    NCTC12898_00072 (rsmB_1)
Enzymes [BR:bez01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     NCTC12898_00072 (rsmB_1)
Ribosome biogenesis [BR:bez03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    NCTC12898_00072 (rsmB_1)

SSDB

Motif

Pfam:

Methyltr_RsmB-F Methyltransf_31 Ubie_methyltran FtsJ Methyltransf_25 MTS Methyltr_RsmF_N N6_Mtase GCD14 Methyltransf_15 PrmA

Other DBs

NCBI-ProteinID:

VEJ39605

Position

1:134930..136216

AA seq 428 aa
MRLGGRLQAAIDVLKEIEMRHRPVGEALKDWGLSHRFAGAGDRAAIGTIVYDVLRRRYSL
QWRMESDDIRDIVFATLLDTGKMTLEQIDNALEGDRFAPQLLEDQQRKSWQKRQLVDAPD
YIRGDIPQWCQAHLCPLFGDNWIVEAAALATRPSLDLRVNSLKATPEKVLKELAKTKLQS
FSWFRQALRVAPIEKFDRHPNVQVEPAFQKGYFEIQDLGSQIVAHLVEAQESMQVLDYCA
GAGGKTLALASDMNNRGQIYAYDFDKARLAPIFDRLRRAGVRNVQTRVQKEELKSLIGQM
DRVLLDAPCSGTGTWRRRPDAKWRLTLEQVKQRQTEQRTILNEAIDYLKPNGRLVYITCS
LFADENEEQIFHFLQQHSHFSPIDMQALWQKYFSSSPVQPVFSNYGLTLSPATTKTDGFF
LSVLQKKH

NT seq 1287 nt +upstreamnt +downstreamnt
atgcgattaggtgggcgtttgcaagccgcaatagatgttctcaaagagatagaaatgagg
catcgtcctgtaggagaagctttaaaggattgggggctttctcatcgttttgctggagca
ggtgatcgtgcagctattggtacaatcgtttatgatgttttaagacgacgatattcttta
caatggcgaatggagagtgatgatattcgggatattgtttttgctaccttattagatacg
ggaaaaatgacgctggagcaaattgacaatgcgttagaaggagatcggtttgcaccgcag
ttattagaggatcaacagcgcaaatcgtggcaaaagcggcaattagtggatgcaccagac
tatattcgtggtgatattcctcaatggtgtcaagcacatctttgtcctttatttggtgat
aactggatcgtggaagctgctgcactagcaacgcgtccttctttagacctacgggtcaat
agcctaaaggcaacaccagaaaaggtactaaaagaattagcaaaaacaaaacttcaatcg
ttttcatggtttcggcaagctttaagagttgcgccgattgaaaaatttgatcgtcatccc
aatgttcaagtagagccagcttttcaaaaagggtactttgaaatacaggatttagggtct
caaattgttgctcatcttgtggaagcgcaagaaagtatgcaggtattagattattgtgca
ggtgctggtggcaaaacattagctttagcttccgatatgaacaatcgtgggcaaatttat
gcttatgattttgataaagcacgcctagcgcctatttttgatcgtcttcgacgcgctggt
gttcgtaatgtacaaacgcgagtacaaaaagaagaattgaagtctttaataggtcagatg
gatagagttttgttagatgcaccctgtagcgggacaggaacatggcgtcgtcgtccagat
gcgaaatggcgtttaacactagagcaggtaaaacaacgccaaacagaacagaggacgatt
ttgaatgaggcgatagattatcttaagccaaatgggcgcttagtctatattacctgttct
ctttttgcagatgaaaatgaggaacaaattttccatttccttcaacagcattctcatttt
tctccaatagatatgcaggcactttggcagaaatatttcagttcttcacctgtgcaaccc
gttttttcaaattatggcctgactttatcgcctgcaacaacaaaaacagatggatttttt
ttatctgtgttgcaaaaaaaacattga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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