KEGG   Bartonella elizabethae: NCTC12898_00421
Entry
NCTC12898_00421   CDS       T06159                                 
Name
(GenBank) uracil-DNA glycosylase, family 4
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
bez  Bartonella elizabethae
Pathway
bez03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bez00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NCTC12898_00421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bez03400]
    NCTC12898_00421
Enzymes [BR:bez01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     NCTC12898_00421
DNA repair and recombination proteins [BR:bez03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     NCTC12898_00421
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: VEJ40543
Position
1:complement(515110..515949)
AA seq 279 aa
MLNQTPYSISYEELLNFYKESGVDAVLTDLPIDRFKQSACSEKKLTPVVNISHNQQTSPK
TSPTVKLDHHPLHNSRSIQNEPSAVESAKNATTLDELKSALLAFNGCSLKLTAKNTCFSD
GTAGSPLMLIGEAPGRDEDLQGIPFVGKAGMLLNKILASIGLTRNNVYIANTIPWRPPGN
RTPTPREIALCRPFIERHIYLARPRVLIALGGVAAQFLTGSQNGIIRTRGKWHVYESEDN
IKIPVMPTFHPAYLLRTPSQKKLTWIDFLEVKNRLDSLL
NT seq 840 nt   +upstreamnt  +downstreamnt
atgttaaatcaaacgccgtactcaatttcctatgaagaacttttgaacttttataaagaa
agtggtgtggatgctgttttgacagatttaccgattgatcgttttaagcagtctgcttgt
tcagagaaaaaattaacacctgttgtaaacatttctcataatcaacaaacatcccccaaa
acatctccaactgtaaaattagatcatcatccgctccataactcgaggtctatacaaaac
gaaccttctgctgtagagagtgccaagaatgcaacgacacttgatgaattaaaatctgct
cttcttgcatttaatggctgttcattaaaattgacagcaaaaaacacctgtttttcagat
ggaacagcaggaagccccctgatgcttataggtgaagccccaggacgagatgaggatcta
caaggcattccttttgtgggaaaagcaggaatgttactgaataaaatcctcgcatcaatt
ggcttaacaagaaataatgtgtacattgctaatactattccttggcgtcctccaggaaat
cgtacaccaacaccaagagaaattgccttgtgccgcccttttattgaacgacacatttat
ttagcacgtcctcgtgtgctcatagcactaggaggcgttgcggcacaattccttaccgga
tctcaaaatgggatcatccgaacacgtgggaaatggcatgtttatgaaagtgaggataat
ataaagatacctgttatgccaacttttcaccctgcttaccttcttagaacccctagtcaa
aagaagcttacatggatagactttttagaagtaaaaaatcgtctcgatagccttttgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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