KEGG   Bartonella elizabethae: NCTC12898_00920
Entry
NCTC12898_00920   CDS       T06159                                 
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bez  Bartonella elizabethae
Pathway
bez03410  Base excision repair
bez03430  Mismatch repair
bez03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bez00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NCTC12898_00920 (recJ)
   03430 Mismatch repair
    NCTC12898_00920 (recJ)
   03440 Homologous recombination
    NCTC12898_00920 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bez03400]
    NCTC12898_00920 (recJ)
DNA repair and recombination proteins [BR:bez03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     NCTC12898_00920 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     NCTC12898_00920 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      NCTC12898_00920 (recJ)
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1 QRPTase_C DUF347 CDC45 Collar FmrO
Other DBs
NCBI-ProteinID: VEJ41490
Position
1:complement(1051426..1053210)
AA seq 594 aa
MQLSRYFLNVESSACGQAWLDALDIQGINNARAISQKFGFPDQLARVLSARDVDETEAVA
FINPTLRMLMPDPESFVDMQCAAERIIKALLNQEQVAVFGDYDVDGACSSALIARFFRYF
GIEVKIYIPDRIVEGYGPNEQAMRMLVQEGARLIITVDCGANSSEAVKAARLAGADVVIL
DHHQMSEVHQEAVALVNPNRPDDFSGQGHLCAAGVVFVTLAWVHHLLRKKQFEGMLPDLL
SMLDLVALATICDVVPLQGVNRAFVMKGLQVARSMHNPGVAALTKVARIGEPLNSFHLGF
LLGPRINAGGRIGDQALGARLLSCEDKDEADRIAEQLNQLNQERQEMENIQLAQAESYIA
SLYQDQETPLSLVISHKEWHPGIIGILASRLKERFFCPVFAIALKEDGNGVGSGRSISGI
DLGALVREAVTLNLLEKGGGHSMAAGITIQSTKIESFRKWLEEKVSGMVSQLHAKKSLSI
DGSLSASGVNQALFELLEKAGPFGTGNATPVFVLPSHRLMNLSEVGKGHLRLIVSNAEGK
KLQGIAFRAVGTALGDFLSKNIGEMIHLAGHLSLNYWNGTINPQLRVIDAAAVV
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgcagctgtctcgttattttctcaatgttgaatcttctgcttgtggtcaagcttggcta
gatgctcttgatattcaagggataaataatgcacgtgcgatttctcaaaaatttggtttt
cctgatcagttagcacgagttctttcggcaagagatgtggatgaaactgaagctgttgct
tttattaatccaacattgcgcatgctcatgcctgatccagaaagttttgttgatatgcaa
tgcgcagcagagcgtatcattaaggctcttctcaaccaagaacaggttgctgtttttggt
gattatgacgttgatggcgcttgttcatcggcacttatagcgcgtttttttcgttatttt
gggattgaagttaaaatttatattcctgatcgtattgttgaaggctatggaccgaatgaa
caagctatgaggatgcttgtgcaagaaggcgcccgtttaattatcactgttgattgtggg
gcgaacagttcagaagccgtcaaagcagcaagactggcaggtgctgatgttgtaatttta
gatcatcatcaaatgtcagaggttcatcaagaagccgttgctcttgttaatcctaatcgc
cctgatgatttttctggacaagggcatttatgtgcagcaggtgttgtctttgttacgtta
gcttgggttcatcacttgttgcgaaaaaaacaatttgaagggatgttgcctgatcttctc
agtatgcttgatcttgttgccttggcaaccatatgtgatgttgttccattgcagggtgtt
aaccgtgcttttgtaatgaaaggacttcaagtcgctcgttctatgcataatcctggggtc
gctgctttaacaaaggttgcacggataggcgaaccgcttaatagttttcatttaggtttt
ttgttaggtcctagaattaatgcaggaggacgcattggcgaccaagcgttgggggcacgt
ttgctcagttgtgaggataaagatgaggcggacagaatagcagaacaattaaatcaactt
aaccaagaacgccaagaaatggagaacattcaattagcgcaggccgaatcttatattgct
tctctttatcaagatcaagaaacaccattgtcacttgtcatttctcataaagaatggcat
ccggggattattggtattcttgcttcccgcctcaaagagcgttttttttgtcctgttttt
gctattgcattgaaagaagatggaaatggtgtagggtcgggacgctcaattagcggcata
gatttaggggcacttgttcgtgaggcggttacactgaatttgttagaaaaaggaggggga
catagtatggcagcaggcattacaattcaatcaacaaaaattgaaagctttcgaaaatgg
ctagaagaaaaagtttctggcatggtttcacaattgcatgcaaaaaagtcccttagtata
gatggttctctttctgcttctggtgttaatcaagcactatttgagttgcttgaaaaggca
ggaccttttgggacaggaaatgcaacacctgtttttgttcttccctctcatcgattaatg
aacctatctgaagttggtaaaggacaccttcgcctcattgtatctaacgcggaaggaaaa
aaactgcaaggaatagcttttcgtgctgtagggactgcacttggagattttttgtcgaaa
aatattggggaaatgattcatttagctggtcatcttagtttgaattattggaatggcacg
atcaatccgcaactgcgtgtgattgacgctgctgcagtagtttaa

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