KEGG   Brachybacterium faecium: Bfae_10380
Entry
Bfae_10380        CDS       T00965                                 
Name
(GenBank) guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
bfa  Brachybacterium faecium
Pathway
bfa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bfa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Bfae_10380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bfa03019]
    Bfae_10380
   03016 Transfer RNA biogenesis [BR:bfa03016]
    Bfae_10380
Enzymes [BR:bfa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     Bfae_10380
Messenger RNA biogenesis [BR:bfa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Bfae_10380
Transfer RNA biogenesis [BR:bfa03016]
 Prokaryotic type
  tRNA degradation factors
   Bfae_10380
SSDB
Motif
Pfam: RNase_PH PNPase KH_1 S1 RNase_PH_C KH_2 KhpA-B_KH
Other DBs
NCBI-ProteinID: ACU84886
UniProt: C7MBB3
Position
1165255..1167516
AA seq 753 aa
MAMEGPEITATTAVIDNGSYGRREIRFETGRLAQQAAGAVAVYLDDDTMVFSATAVSNKP
KEHFDFFPLTIDVEERMYAAGRIPGSFFRREGRPGTDAILAARLTDRPLRPAFVKGLRNE
VQVVLTVMANGPDDAYDVVGINGASASTQISGLPFSGPIGAVRIALMPNSQGGGQWVAFP
TFSQLDEAVFSMVVAGRIVEDDVAIMMVEAEATDNSWNLIKEQGAIAPTESVVAEGIEAA
KVFIRSLCVAQQELAATAAKPVREFPLFLDYQDDAYEIVEAAATERLAEVMSIAAKTERE
ERTEQLLAEITEELSGEGKQLEDREKEVTGAFRALTKQVVRKKVLTEGVRIDGRGLRDIR
ALSAEVEVLPRVHGSALFQRGETQIMGVSTLNMLKMEQQIDSLGPVERKRYIHHYNFPPY
STGETGRVGSPKRREVGHGMLAERAIVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCA
STLSLLNAGVPLRAPVAGIAMGLISDTIEGEIRYAALTDILGAEDAFGDMDFKVAGTGEF
ITAIQLDTKLDGLPASVLTGALSQAHEARLAILGVLGEAIDAPDEMSPNAPRVLAVTVPV
DKIGAVIGPKGQMINQIQDDTGADITIEDDGTVYIGATDGPSAEAARSAVNAIANPMVPE
VGERYLGTVVRVVDFGAFISLTPGKDGLLHVTQLRKLNGGKRVDNVEDVATVGQKIEVEI
REIDARGKISLAVIEEDEAESAESAASEATTAE
NT seq 2262 nt   +upstreamnt  +downstreamnt
atggccatggaaggccctgaaatcaccgctaccaccgcggtcatcgacaacggctcctac
gggcgccgcgagatccgcttcgagaccggccggctcgcgcagcaggccgccggcgccgtc
gccgtctacctcgacgacgacacgatggtgttctccgcgaccgccgtctcgaacaagccg
aaggagcacttcgacttcttcccgctgaccatcgacgtcgaggagcggatgtacgccgcg
ggccgcatccccggctccttcttccgccgcgagggccgtcccggcaccgacgcgatcctc
gccgcacgcctcaccgaccgcccgctgcgccccgccttcgtcaagggcctgcgcaacgag
gtccaggtcgtcctgaccgtcatggccaacgggccggacgacgcgtacgacgtcgtcggc
atcaacggcgcctccgcctccacgcagatctccggcctgcccttctccggcccgatcggc
gcggtgcgcatcgcgctcatgcccaactcccagggcggcggccagtgggtcgccttcccg
accttctcgcagctcgacgaggccgtgttctccatggtcgtcgcgggacgcatcgtggaa
gacgatgtggcgatcatgatggtcgaggccgaggccaccgacaactcctggaacctcatc
aaggagcagggagcgatcgccccgaccgagtccgtcgtggccgagggcatcgaggccgcg
aaggtcttcatccgcagcctgtgcgtggcccagcaggagctggccgccaccgccgccaag
ccggtgcgcgagttcccgctgttcctggactaccaggacgacgcctacgagatcgtcgag
gccgccgccaccgagcgtctcgccgaggtcatgtcgatcgcggccaagaccgagcgcgag
gagcgcaccgagcagctgctcgccgagatcaccgaggagctctccggcgaggggaagcag
ctcgaggaccgcgagaaggaggtcaccggggcgttccgcgcgctgaccaagcaggtcgtg
cgcaagaaggtcctcaccgagggcgtgcgcatcgacggccgcggcctgcgtgacatccgt
gcgctctccgccgaggtcgaggtgctcccgcgggtccacggctcggccctgttccagcgc
ggtgagacccagatcatgggcgtgtccacgctgaacatgctgaagatggagcagcagatc
gactcgctcggcccggtcgagcgcaagcgctacatccaccactacaacttcccgccctac
tccaccggtgagaccggtcgcgtcggctccccgaagcgtcgcgaggtcgggcacggcatg
ctcgccgagcgcgcgatcgtgccggtgctgcccagccgcgaggagttcccctacgcgatc
cgccaggtctccgaggcgctgggctccaacggctccacgtcgatgggctccgtctgcgcc
tcgaccctgtcgctgctgaacgccggtgtgccgctgcgcgcgccggtcgccggcatcgcc
atgggcctcatctccgacaccatcgagggggagatccgctacgcggccctcaccgacatc
ctcggtgcggaggacgccttcggcgacatggacttcaaggtcgccggcaccggtgagttc
atcaccgcgatccagctggacaccaagctcgacggcctcccggcctccgtgctcaccggt
gcgctgtcgcaggcgcacgaggcgcgcctggcgatcctcggcgtgctcggcgaggcgatc
gacgcgcccgacgagatgagccccaacgccccgcgcgtcctcgcggtcaccgtcccggtc
gacaagatcggtgcggtcatcggcccgaagggccagatgatcaaccagatccaggacgac
accggtgcggacatcaccatcgaggacgacggcaccgtgtacatcggtgcgaccgacggc
ccctcggcggaggccgcgcgctccgcggtcaacgcgatcgcgaacccgatggtccccgag
gtcggcgagcgctacctcggcaccgtcgtgcgcgtggtcgacttcggcgccttcatctcg
ctcaccccgggcaaggacggcctgctgcacgtcacccagctgcgcaagctcaacggcggc
aagcgggtcgacaacgtcgaggacgtcgccacggtggggcagaagatcgaggtggagatc
cgcgagatcgacgcccgcggcaagatctccctcgccgtgatcgaggaggacgaggcggag
tccgccgagtccgccgcctcggaggcgaccaccgccgagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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