KEGG   Bacteroides fragilis BOB25: VU15_12940
Entry
VU15_12940        CDS       T03897                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
bfb  Bacteroides fragilis BOB25
Pathway
bfb00300  Lysine biosynthesis
bfb00470  D-Amino acid metabolism
bfb01100  Metabolic pathways
bfb01110  Biosynthesis of secondary metabolites
bfb01120  Microbial metabolism in diverse environments
bfb01230  Biosynthesis of amino acids
Module
bfb_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
bfb_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bfb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    VU15_12940
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    VU15_12940
Enzymes [BR:bfb01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     VU15_12940
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AKA52517
UniProt: A0A2M9UVU4
Position
complement(3191175..3192338)
AA seq 387 aa
MKTVFPIHKFRELPTPFYYYDTKVLRDTLACVNREVARYDNFSVHYAVKANANPKVLTII
RESGLGADCVSGGEIRAAIKAGFPAGKIVFAGVGKADWEIDLGLDYDIFCFNVESVPELE
VINELAAAKGKVANVAFRINPNVGAHTHANITTGLAENKFGISMHDMDKVIDVALELKHV
KFIGLHFHIGSQILDMGDFIALCNRVNELQDKLEARHILVEHINVGGGLGIDYDHPNRQP
IPDFADYFRTYDEHLKLRPHQTLHFELGRAITGQCGSLISKVLYVKQGTNKQFAILDAGM
TDLIRPALYQAHHKMENLTSEDPVVETYDVVGPICESSDVFGKAVDLNKVKRGDLIALRS
AGAYGEIMASGYNCRELPKGYISEELV
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgaaaactgtattccccattcataaatttcgcgagttgccgactcctttctattattat
gatacgaaagtgcttcgcgacacgctggcgtgcgtcaaccgtgaggtggcacgttacgac
aatttcagtgtacactatgccgtcaaggccaatgccaatcctaaggtactgaccatcatc
cgcgaaagtggactgggtgccgattgtgtcagcggaggcgaaatccgcgctgccatcaag
gccggtttccctgccgggaagatcgtttttgccggagtcggtaaggctgattgggaaatc
gacctgggactcgattacgatattttctgtttcaatgtcgagtcggtgcctgagttggaa
gtcatcaacgagttggctgccgccaaaggtaaagttgccaatgtagctttccgcatcaat
cccaatgtaggtgcgcatacccatgccaatatcactaccggattggccgaaaacaaattc
ggtatcagcatgcacgatatggataaggtgatcgacgtggctttggagctgaagcatgtg
aagttcatcggtcttcatttccacatcggttctcagattctcgatatgggcgatttcata
gcgctatgcaaccgtgtcaacgaattgcaggataagctcgaagcccgtcacatccttgtg
gagcatatcaacgtaggcggtgggctgggcatcgattatgatcaccccaaccgtcagcct
attccggattttgccgactatttccgtacatacgacgagcacctgaagcttcgtccgcat
cagactttgcattttgagctgggacgtgccatcacgggacaatgcggttcgctgatttca
aaagtactttatgtcaagcaaggtaccaacaagcaatttgccatcctcgatgcgggcatg
accgatttgattcgtcccgccctctatcaggcacatcacaagatggagaaccttacttcc
gaagatcctgtggtcgaaacttatgacgtggtgggccccatctgtgagtcgtccgatgta
ttcggcaaggctgtcgatctgaataaggtgaagcgtggcgatctgatagcccttcgttct
gccggtgcttatggcgagattatggcttcaggctataactgccgtgaactgccgaaaggg
tacatctcagaggagttggtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system