KEGG   Brevibacillus formosus: BP422_02020
Entry
BP422_02020       CDS       T04939                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
bfm  Brevibacillus formosus
Pathway
bfm03030  DNA replication
bfm03430  Mismatch repair
bfm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bfm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BP422_02020
   03430 Mismatch repair
    BP422_02020
   03440 Homologous recombination
    BP422_02020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bfm03032]
    BP422_02020
   03400 DNA repair and recombination proteins [BR:bfm03400]
    BP422_02020
Enzymes [BR:bfm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BP422_02020
DNA replication proteins [BR:bfm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BP422_02020
DNA repair and recombination proteins [BR:bfm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BP422_02020
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2
Other DBs
NCBI-ProteinID: ASJ52423
UniProt: A0A220MBY1
Position
378291..381719
AA seq 1142 aa
MTSFVHLHVHTEYSLLDGAARIDALVKRASELGMHALAMTDHANLYGAIPFYKACLEAGI
QPIIGMEIYVIEGNLQDRVRNAPPPSHLIVLAENETGYRNLLKLSTIANTDGNYILPRLN
KEVLAKHADGLIALSGCQQGEVAKLLLAGEADAAKEAALQYQRMFGEQHFYLELADHGLE
VERRLNARLVKLSQETGIPLVATNNVHYIHREDHQHHDILLAIKEGKTIGEENRFRYETD
QYYLKSAEEMAALFAFAPQALANTVAIADRCKLELSFGAHILPEFPLAEGQDSTQYLREL
CEKGCRERYGEITPEAQARLDHELAIITGTGFTDYFLIVWDFMRYAHENGIPTGPGRGSA
AGSLVAYVLKITNVDPLRFQLLFERFLNPERVTMPDIDIDFSVERRDEVIHYVASKYGHD
RVAQIITFGTMAARAAVRDVGRALGLSLGIVDRVAKMIPQSPGMTFERAVQINPDIGKLC
AENKQAAQLIETAKGVEGLPRHASTHAAGVVISREPLTNYVPLQTGNEGLALTQYPMEIL
EEVGLLKMDFLGLRNLTIIQETLRHLQEQGISLDLDKLPTDDEKTFRMLSRGETTGIFQL
ESSGMRNVLRDLKPSSLDDIIAVLALYRPGPMEIIPQYIAAKHGTSKVQYAHPVLEPILR
ETHGFMIYQEQIMQISSTLAGFSLGEADILRRAVGKKKRELLAEQREKFVAGCVRQGYGE
ELGNQVYDLIVRFADYGFNKAHSVAYAVIAYQMAYLKATYPLAFMAALLSLSIGSQTRIA
EYTEEARRLQLTVLGPDVNKSLAYFTVEQDAIRFGLAAVKNVGYGAIESIVKERKGRPYR
DVFDFCARVDARLVNRRVVESLTLCGALDSLPGHRSQLLLLLDEAVGKANSKRIERDANQ
LNLFAGEEDAAPLREPAEYPEVPPLSHTQQLKEERDLIGVYLSGHPLDQFAHVASRPEVA
VISSLGDVPRDKTVKVFGMITEARRIQTKKGDQMAFITLEDKTAPVELVVFPQVYAKYAP
LLEREQIVVAEARVDHQEDMVKLLASRFWDAQTLPQPKSETVLFVKISAEQERDSTLQRL
SRLFVEKKGTIPVILFYEGKRQTIRLPKANWVDVDESFLEQAREIVGPDSVIRKEMPINW
GG
NT seq 3429 nt   +upstreamnt  +downstreamnt
atgacctcctttgtccatttgcatgttcatacggagtacagcctgctggatggagcagca
cgtatcgatgcgctagtgaagcgagccagcgaattgggcatgcatgcattggcgatgaca
gaccatgccaatctgtacggggcgatcccgttttataaagcttgtctggaggcaggcatc
caaccgattatcgggatggaaatatacgtaatagaaggaaatcttcaagatcgcgtgcga
aatgcaccgccgcctagtcatctgatcgttctcgctgaaaacgaaacgggctaccggaat
ctcctgaagctgtcgacaatcgcgaatacagacggcaactacatccttccgcgtctcaat
aaagaggtgttggcaaagcatgcggacggcctcattgcactgagcggctgccagcaaggg
gaggtagccaagctgttactggctggagaagcggacgctgcgaaagaagcagctctccag
tatcagcgaatgtttggtgagcagcatttttacttggagctggctgatcacggactggaa
gtggagcgcaggctgaatgctcgcctcgtgaaactaagccaggagacggggattccgctg
gttgcgacgaacaacgttcactacatccacagggaggatcaccagcatcatgatatcttg
ctggcgatcaaagaaggcaagaccattggcgaagaaaaccgttttcgttacgagacggat
cagtactatctgaaaagtgcagaggaaatggcagcgctctttgcttttgctccccaggcg
ttagcgaatacggtagctattgcagacaggtgtaagctggagctttcctttggtgcgcat
attttgccggaatttccgttggcagagggacaagattcgacgcagtatttgcgtgaactg
tgtgaaaagggctgccgggagcgatacggtgagattacgccagaggcacaagcgcgtctg
gatcacgagctggcgataattacagggacgggcttcactgattacttcctgatcgtatgg
gatttcatgcggtacgctcacgaaaacgggataccgactggacctggacgcggatctgcg
gcaggtagcctggtcgcgtacgttttgaaaatcacgaatgtcgatccacttcgctttcag
ttgctctttgaacgctttctcaacccggagcgggtgacgatgcccgatattgatatcgat
ttttccgtagagcgccgtgacgaagtcattcactatgtagcgagcaagtacggtcatgat
cgcgtcgcccagatcattacctttggtacgatggcggctcgtgcagcagtgcgtgacgtt
gggcgggcgctaggcttgtctttgggcatcgtggatcgcgttgcgaaaatgattccgcaa
tcgccaggcatgacatttgaacgagccgtgcagatcaacccggatatcggcaagctatgc
gcggaaaacaaacaggcagcgcaactgatcgaaaccgcaaagggcgtagaaggtttgccg
cgtcacgcctctacgcatgcagcgggtgtcgtcatttcgcgtgaaccgctgacgaattac
gttccattacagacgggcaatgaaggcttggcgcttactcagtatccgatggaaattctc
gaagaagtcggtctgttaaagatggacttcctcggcttgcgcaatttgacaatcattcag
gagacgttgcgtcatttgcaggagcagggaatatcgcttgatctggataagctgccgaca
gacgacgagaaaacgtttcgtatgctctcccgcggggagacaactgggattttccaactg
gaatcttcggggatgcgcaatgtgctgcgggatttgaagccgagcagccttgatgacatc
attgcggttctggcattgtatcgcccggggccgatggagatcatcccgcagtacatcgcc
gccaagcacgggactagcaaagtacagtacgctcatccggttctcgagccgattttgcgg
gagacgcacggtttcatgatttatcaggagcaaatcatgcagatttcctcaacactggca
ggcttcagtctgggtgaggcagatattttgcgccgagcggtcgggaaaaagaaacgggag
ctattggcggagcagcgggaaaagttcgtggctggttgtgtccggcaagggtacggagaa
gagctgggcaatcaagtctacgatttgatcgtgcgctttgccgattacggctttaacaaa
gcccactcggttgcttatgcggtcatcgcctaccagatggcttatttgaaagcaacgtac
ccgcttgcgttcatggcagcgctgctctccttgtccattggcagtcaaacgagaattgcc
gagtacacggaggaagcgcggcgactgcagcttaccgtgctcgggcctgacgtgaataag
agcctggcttactttacagtggagcaggatgcgattcgcttcggtttggccgcagtgaaa
aatgtcggctacggtgccattgaatcgatcgtgaaagagcgcaaaggccgaccgtatcgc
gacgtctttgatttttgtgcgcgcgtggatgcgcggttagtcaatcgcagagtagtagag
tcgcttactttatgtggtgcgctggactcgttaccaggtcatcgcagtcagcttttgctc
ttgctggatgaagcggtagggaaggcaaacagcaagagaattgaacgagacgccaaccag
ctcaatctatttgcgggagaagaagatgcggcaccattgcgcgaaccggcagaatatccc
gaggtaccgccgctctcacatacgcagcaattaaaagaggagcgggacttgatcggggta
tacctctcgggtcatccacttgatcagtttgcccatgtcgccagtcgtccggaggtagcg
gttatctcttcgttgggtgacgtaccgcgcgacaagacggtgaaagtattcggaatgata
acggaagcccgacgcatccaaacgaaaaaaggggaccagatggcgtttattacgctagag
gacaaaacggcaccagtagagctggttgtcttcccgcaggtgtatgcgaagtatgcgccg
ctgctcgagcgcgaacaaatcgtcgtggcagaagcccgagtcgatcaccaggaagacatg
gtcaagctcttggcttcccgtttctgggatgcacaaacgctgccgcagccgaagtctgag
accgtattatttgtcaaaatatcggcagagcaagagcgtgattcgacgctgcaaagactt
tcgcgcttgtttgtcgaaaaaaaaggaacgattcccgttatcctcttctacgaaggaaaa
agacagacaattcgcctgccaaaagcaaattgggtagacgtagatgagtcatttttggag
caagcgcgagaaattgtggggcctgacagcgtaattcggaaagaaatgcctataaattgg
ggaggatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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