KEGG   Brevibacillus formosus: BP422_04650
Entry
BP422_04650       CDS       T04939                                 
Name
(GenBank) hypothetical protein
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
bfm  Brevibacillus formosus
Pathway
bfm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bfm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BP422_04650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bfm03400]
    BP422_04650
Enzymes [BR:bfm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BP422_04650
DNA repair and recombination proteins [BR:bfm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BP422_04650
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 HHH_5 AAA_11 Viral_helicase1 UvrD-helicase AAA_22 AAA AAA_16 nSTAND3 T2SSE TsaE DEAD AAA_25 AAA_29 AAA_28 Zeta_toxin AAA_5 NTPase_1
Other DBs
NCBI-ProteinID: ASJ52905
UniProt: A0A220MD23
Position
964608..966869
AA seq 753 aa
MDEQQSISLFAENFIRGFVSQEIFYKEETWYGVIRLKIEETTESIKESEVIIVGNFPRPH
PDELYTFYGEWKTHARFGQQYVAKRYERETPKTLAGVERYLASGLFQGIGKKMAKRIVEQ
LGVDALSIIADFPERLAEVPGISEQRAKTIYDSVVEHRSLESAMVFLYDFGIGVNMALRI
YQTYKLETMTVLKEEPYRLIEDVVGIGFKRADDIARATGIAASSEERVKAAALFVLQEAS
YSEGHVYLPVEELCEKTMRLLEECGGHVFSGDDIRLAVEALFVASKIAWEDERVYLPSLF
FAELGLAKRLRHFAARDEFGTFPTSEFYRALGAVEDELGITYAQTQRDAIEQAIKAGLML
LTGGPGTGKTTVIRGICRVFSQLHGLSLDLKKYNEENPFPIVLVAPTGRAAKRMTETTGL
PAMTIHRLLGYKGESFEHDAEHPIRGRLLIVDEMSMVDIWLANQLFRAVPDDMQIIMVGD
PDQLPSVGPGNVLFDMIRSGLLSLVQLTEIYRQAEESTIIRLAHDVRKGNVPADLLHTTP
DRRFFTSLPQEVPEAVKQICFGAVKKGYTAKDVQVLAPIYKGNAGVNRLNEELQELFNPK
TPQKREVTFGETTFRTGDKVLQLVNNAEEQVFNGDMGEIVAIFFPNENAENQEMLVAAFD
NREVVYKRSDYHQLTLAYCCSVHKSQGSEFPIVIMPFVKSYYRMLRRKLVYTGITRSKSF
LIMCGEPDAFRAAVESDEEGVRYSYLEQRLKQE
NT seq 2262 nt   +upstreamnt  +downstreamnt
atggacgagcagcagtcaatctcgctgtttgcggaaaacttcattcggggatttgtttct
caagaaattttttacaaggaagaaacctggtacggagttatccgtcttaagatagaagag
actacagaatcgattaaagaatcggaagtcattattgtcggtaattttcctcgtccgcat
ccagacgagctgtacaccttttacggtgaatggaaaacacacgcccgttttggacagcag
tacgtagcaaagcgctatgaacgtgaaacgccgaaaacattggccggggttgagcgctac
ttagccagtggcttgtttcaagggatcggaaagaagatggccaaacgaattgtcgagcag
ttaggggtagatgcgctgtcgattatcgcggacttcccggagcgattggctgaggtacca
ggcatttctgaacaacgtgccaaaacgatctatgattcagtagttgagcatcgttccttg
gaaagtgccatggttttcttgtacgacttcggcattggtgtgaacatggcgctgcgtatt
tatcagacctacaagctggaaacgatgacagtgctgaaggaagagccttaccggttgatt
gaggatgtcgtaggaatcggctttaaacgggcagatgacattgcacgagcaactggaatc
gctgcttcctcagaagaacgtgtgaaggcggcggcactctttgtgttgcaagaggcttcg
tattcagaaggacatgtttatttgcctgtggaggagctttgtgaaaaaacgatgcgcctt
cttgaggagtgcggggggcacgtcttttctggtgacgatattcgactggcagtggaagcc
ctgtttgtggcgagcaaaattgcctgggaagatgagagggtgtatttgccctccctgttt
tttgccgagctcggtttagctaaaagactgcgtcacttcgctgcgcgggatgaattcggt
acgttcccgacatcggaattttaccgtgcattaggggcggtcgaggatgagctggggatt
acgtatgcccagacgcagcgtgatgccattgaacaagcgatcaaagcaggtctgatgctg
ttgacagggggacctggtacggggaaaacgacagtcattcgcgggatatgtcgtgtcttt
tctcagctccatggattgtctttggacttgaaaaaatacaacgaagaaaatccgttccca
atcgttcttgtggctcctactggacgtgcagcaaaacgtatgacagagactacgggttta
ccagcaatgaccatccatcgcttgcttggttacaaaggggagagctttgagcatgacgcg
gagcacccaatccgtggccggctattaattgtggatgaaatgtccatggtcgatatctgg
ctcgcaaatcaattgtttcgggcggtcccagacgacatgcagatcatcatggtaggtgac
cctgaccagttgccttccgtaggaccaggcaacgtcctgtttgatatgatccgatctgga
ttactgtcgttggtacagctgacagaaatttatcggcaagcagaagaatctaccattatt
cggttggcccatgatgtacgcaaggggaatgtaccggcggatttgcttcacaccaccccg
gatcggcgattcttcacaagtttgccacaagaagttccggaagcagtgaaacaaatttgc
ttcggagccgtaaaaaaaggatatacggcaaaagatgttcaggtattagcccctatctat
aaaggtaatgccggtgtgaaccggttgaatgaagaattgcaggagctgtttaatccgaaa
acgccgcaaaagcgtgaagttactttcggagagacgactttccgtacaggagacaaggtt
ctgcaattggtgaacaatgccgaagaacaggtgtttaatggtgacatgggtgagatcgtc
gccatctttttcccgaatgaaaatgcggagaaccaggagatgctggtcgctgcctttgat
aacagggaagtggtgtacaagcgttcggattaccatcagctgacgcttgcctactgctgc
tcggttcataagtctcaaggcagcgaatttccgattgtgatcatgccgtttgtcaaaagc
tactaccgtatgctcagacgcaagttggtctataccgggattacccggagcaaatcattc
ctcatcatgtgtggagagccggatgcgttccgtgctgctgtagagtctgatgaggagggg
gtacggtacagttacctggagcaacggctaaagcaagagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (32)   

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