KEGG   Paraburkholderia fungorum: OI25_35
Entry
OI25_35           CDS       T03799                                 
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
bfn  Paraburkholderia fungorum
Pathway
bfn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bfn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    OI25_35 (recC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bfn03400]
    OI25_35 (recC)
Enzymes [BR:bfn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     OI25_35 (recC)
DNA repair and recombination proteins [BR:bfn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     OI25_35 (recC)
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: AJZ61076
Position
1:complement(45138..48515)
AA seq 1125 aa
MLQLFYSNRYETLVGALLDDLAQAPSDPWRAQPVIVPSAAVRRRLELDIAARQGICANVN
FGYLAQWLWAQIGGVIEVPRHSPFAPDRLVWRCYRLLGEADEALPWNASPRLRTYLDAAD
ASMRYELARRVATVLDHYLTYRPEWLLQWQKGGSIFASGAAGDTGPRLVGASESAREDER
WQAALWRAVLAEVAGDAQTPAAALPPAYRFLEEIGTLDLEAISNAQWPEAVSVFALPTMP
PLHVALLRALSRWVDVRLYVLNPCREFWFDVVSAGRVEALDAAGQLDYQQVGHPLLAEWG
RQTQAQLHMLHELTESAASGETGEFSENPEPSWLAAVQNGILELREETDTDELPIENGIE
VHVCHSLSRQLEVLHDRLLGWFDEFDDLQPSDVLVAVSDLAAAGPLIDAIFGTAPPGDTR
RIPYRITGLPPSQANPVARLLLDWLALPERSVGAPDLIEWLRVDAIAARYGIDASALEAA
QEWLAAAGARRGLAPGEPTGEHVPVARHTFADALTRLYLGYAMPDGGEPVDAWLPVEGAD
GSDAELLGRLSSFVDDIESFAQRCAVEQTPAEWAQLLLETLAQCFDGGVEFADSLAAVRD
AIDKMGDAMQAGAQDVGLPATVVRGALTEALDDPARGGVPWGSVTFSSLTSLRGLPYRIV
CLLGMDDGVLPSLARADEFDLMAAFGKAGDRQRRDDERNLFLDLLLAARDRLFIAYTGRS
IRDNAPLPPAALVDELLDHLAQVSAGEGASPAEIETARHAFIIDHPLQAFASDYFSSQRG
LFTYDTDRAELATLLAAPQHPAAAPFFDQPLPAEDTASVAFDEFVRFWRHPARALLRDRL
GIVLSDAQGELLDTEPFELDWAGRDALAERLLPVLLDSGAEDQGGMFERVRRVAAASPEL
PGGATGAVWRSRELGALRQLADSVRREVASGVERLPFVLDIKPRWPAGADIADTLFGPHD
AALRKAAETPLQLHGTLNLLTETGQVIFRYAKATARDYLSAWLAHLVYCAAQPNGPRRTV
WHGSGESFELTPVAAPLDELAPLAALFRAGRRLPLRFFPKSAWVKISESDSAAQGVWIND
RVRGESDDPALRIALRGTPLTLDEPFGSLASIVFKPLLQHLRSTS
NT seq 3378 nt   +upstreamnt  +downstreamnt
atgctccagctcttctactcgaaccgctacgaaacccttgtcggcgcgctgctcgacgac
ctggcacaagcgccgtccgacccttggcgcgcgcagcccgtaatcgtcccgagcgcggcc
gtgcgccgccggctcgagctcgacatcgcggcgcgccagggtatttgcgcgaatgtcaat
tttggttacctcgcgcaatggctgtgggcgcaaatcggcggcgtgatcgaggtgccgagg
cattcgccgttcgcgccggaccggctcgtctggcgttgctaccggctgctgggcgaagcg
gacgaagctttgccgtggaatgcctcgccgcgtctgcgtacgtatctcgatgcggcggat
gcgtcgatgcgctacgagctggcgcgtcgtgtggccaccgtgctcgaccactatctgacc
tatcgcccggaatggctgctgcaatggcagaagggcggttcgatcttcgcgagcggcgcc
gcgggagacaccggcccgcgtctcgtcggcgcaagcgagtcggcgcgcgaagacgagcgt
tggcaagctgcactgtggcgcgccgtgctcgccgaagtggcaggcgacgcgcaaacgccc
gcggccgctctgccgccggcttatcgctttctcgaggaaatcggcacgctcgatctggaa
gccatctcgaacgcgcagtggccggaagcggtcagcgtattcgcgctgcccaccatgccg
ccgttgcacgtcgcgctattgcgagcgctttcgcgctgggtcgacgtgcggctgtatgtg
ttgaacccgtgccgcgagttctggttcgacgtggtcagcgcgggccgcgtcgaagcgctc
gacgccgcaggccaactcgattatcagcaggtgggtcatccgttactggccgaatggggc
cgtcagactcaggcgcaactgcacatgctgcatgagctgaccgagagcgccgcatccggc
gagacgggcgagttcagcgagaatccagaaccgagctggctcgccgccgtgcagaacggc
atcctcgagttgcgcgaggaaacggacaccgacgaattgccgattgagaatggcatcgaa
gtccacgtatgccacagcctgtcgcgccagcttgaagtgctgcatgatcggctgctcgga
tggttcgacgagttcgacgatctgcagccctccgatgtgctggttgcagtgtccgatctc
gcggccgccgggccgttgatcgatgcgatattcggcaccgcgccgcctggcgacacgcgc
cggattccctaccggattaccggcttgccaccttcgcaggccaatccggttgcgcgttta
ctgcttgactggctggccttgcccgagcgtagcgtgggcgcaccggatctgatcgaatgg
ctgcgggtcgatgcgatcgccgcgcgttacgggatcgatgccagcgcgctggaagccgcg
caggagtggctcgcggcagccggtgcgcggcgcgggctggcgcccggcgagccgaccggc
gagcacgtgccggtcgcgcgccatacattcgccgatgcgctgacccggctatacctcggt
tatgcgatgccggatggtggcgagccggtcgatgcctggttgcccgttgaaggcgcggac
gggtcggatgccgaattgctcggccgcctgtcaagtttcgtcgacgatatcgaaagcttc
gcgcagcgctgcgcggtcgagcaaacccctgccgaatgggcgcaattgctgctcgaaacg
ctcgcgcagtgtttcgacggcggcgtggagtttgccgattcgctggcggcggtgcgcgac
gcgatcgacaagatgggcgacgcgatgcaggcgggcgcgcaagacgtcgggttgcctgcc
accgtggtgcgcggcgcactcaccgaggcgctcgacgaccccgcgcgcggcggcgtgccg
tgggggagcgtgacgttttcgtcgctgaccagcttgcgcggtttgccctatcgcattgtc
tgtctgctcggcatggatgacggcgtgttgccgagtctcgcccgcgcggacgaattcgac
ctgatggctgccttcgggaaagccggtgaccggcagcgtcgcgacgacgaacgcaatctg
ttcctcgacttgctgctggccgcgcgggaccggctcttcatcgcctataccggtcgcagc
attcgcgacaatgcaccgttgccgccggccgcgctggtcgacgaattactcgaccacctg
gcccaggtgtcggcgggggaaggggcgagtcccgcggaaatcgaaaccgcgcggcatgcg
ttcatcatcgatcacccgctgcaggcgttcgcgtcggactacttctcgtcgcagcgcggc
cttttcacttacgacacggatcgcgcggaactggccactttgttggccgcgccgcagcat
ccggccgctgcgccgtttttcgatcaaccgttgcccgctgaagacacggcctctgttgcc
ttcgacgaattcgtgcgtttctggcgtcatccggcgcgtgcattgttacgcgaccgcctc
ggtattgtgttgtcggacgcgcagggcgagttgctcgatacggagccgttcgaactcgat
tgggccggccgtgacgcgttggcggagcggctcctgccggtgctgctggacagcggcgct
gaagaccagggcggtatgtttgagcgggtacgccgcgtcgccgcggccagtccggaattg
ccgggcggcgcgaccggcgcggtatggcgctcgcgcgaactcggcgcgctacggcaactc
gccgacagcgtgcgccgcgaagtcgcatcgggtgtcgagcggttgccattcgtgctcgat
atcaagccgcgctggcccgctggcgctgacatcgccgatacgcttttcggcccgcacgac
gcggcgctccgcaaagcagccgaaacaccgctgcaactgcacggcaccttgaatttgctg
accgaaacaggacaagtgattttccgatacgccaaagcgactgcgcgcgactatctgtcg
gcgtggctcgcgcatctggtctattgcgcggcgcagccgaacggcccacgccgcacggtc
tggcatggcagcggcgagagcttcgaactcacgccggttgccgcgccgctcgacgaactt
gcgccgcttgccgcgctgttcagggccgggcgcaggctgccgctgcgctttttcccgaag
agcgcatgggtgaaaatcagcgagagcgattccgcggcacagggcgtgtggatcaacgat
cgtgtgcgcggcgaatccgacgaccctgctttgcgcatcgccctgcgcggcacgccattg
acgctcgacgaaccgttcggcagtcttgcctcgatcgtcttcaaaccgctgctgcagcac
ctgcggagcacatcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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