KEGG   Paraburkholderia fungorum: OI25_6777
Entry
OI25_6777         CDS       T03799                                 
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
bfn  Paraburkholderia fungorum
Brite
KEGG Orthology (KO) [BR:bfn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfn03021]
    OI25_6777
Transcription machinery [BR:bfn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     OI25_6777
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Sigma70_ECF HTH_28 GerE Dimerisation2-like_dom HTH_17
Other DBs
NCBI-ProteinID: AJZ62005
UniProt: A0A2T1AET8
Position
2:complement(3137646..3138191)
AA seq 181 aa
MYSAEQRLKTLLVAGLAGNASEYRLFLSELTRHLRGYLRKRIPHLHDDVEDLVQEILLAV
HNARHTYRPDEPLTAWVHAIARYKLMDFFRTRARRESLHEPLDEHDDIFAECDDEPADAR
RDVGKLLGHLPDKQRLSILHVKLQGLSVAEAAQLTGLSESAVKVSIHRGLKALAAHVRRI
A
NT seq 546 nt   +upstreamnt  +downstreamnt
gtgtattccgcagagcagcgtctgaaaacattgcttgttgcgggcctcgcgggcaacgca
tccgaatatcgcctgttcctgtccgaactgacgcgtcacctgcggggttaccttcgcaag
cggattccacacctccacgacgacgtcgaggatctcgttcaggaaatcctgcttgccgta
cataatgcacgtcatacctaccgcccggacgaacctctcaccgcgtgggtccacgcgatc
gcgcgttataagctgatggatttcttccggacccgtgctcgacgcgagtcgttgcacgaa
ccgcttgacgagcacgacgacattttcgccgagtgcgacgacgagccggcggatgcccgt
cgcgatgtcggtaaactgcttggtcatctgccggacaaacagaggctctcgatcctgcac
gtcaagttgcagggactgtcggttgcagaagccgcccagttgacagggctatcggagtcg
gccgtcaaggtcagtattcacaggggactcaaggctctggccgcacacgtccggagaatc
gcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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