KEGG   Branchiostoma floridae (Florida lancelet): 118409013
Entry
118409013         CDS       T01074                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Pathway
bfo04137  Mitophagy - animal
bfo04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    118409013
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    118409013
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bfo03019]
    118409013
   04121 Ubiquitin system [BR:bfo04121]
    118409013
Enzymes [BR:bfo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118409013
Messenger RNA biogenesis [BR:bfo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     118409013
Ubiquitin system [BR:bfo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    118409013
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF Sina_ZnF TRAF3_RING zf-RING_UBOX zf-TRAF_2 TRAF2_zf ATG16 Tropomyosin DUF1664 Syntaxin_2 Borrelia_REV ADIP Wtap DUF6872 DUF2203 THOC7 HMMR_N DUF4372 DUF2408 Crescentin DUF6778 DUF4407 DUF4515 CENP-K MetOD2 CENP-F_leu_zip DUF3450 Fez1
Other DBs
NCBI-GeneID: 118409013
NCBI-ProteinID: XP_035665773
UniProt: A0A9J7KLT4
Position
Unknown
AA seq 550 aa
MPGLSVKLKGEGTDPKYCCSSCGLLLNEPRQTSCGHRYCKSSVEDLTRPDGGQCKVPSCG
QHIKIEDVFPDKAIEREIKSIPVLCNNDDDGCKWEGLLKDLKAHLDECEYEKIACIHKNC
GEKIPRRDLSKHLNENCGFRSAACQFCKESHPFKDIANHQESCPMAPARCKWCGKKGLTR
SQLQDHQHPQTGDCPNMKLPCHFEPVGCTEKLERKQHGDHQKKTITAHLNMVLAMLLQLA
TNVEGLRDEDVEARENMRAAIPRLDKNLNDQITKVSELERKLSSYQSEGATGSGSSGLKA
LENRIEQIRAKVEDLIKKLAAWEPRVGTFEGIVAVLNREIEKCSSQMEAYERQRRQDREI
IETLERKVRSLERIIALKDVALAEQDLRIQTLELTSYDGILTWKIADFTRKRHDAITGKT
ASFYSPCFFTSRTGYKMCARIYLNGDGMGKGTHVSLFFVVMRGHYDGLLRWPFRQKVTFM
LLDQNNREHVIDAFRPDPTSSSFQRPTSDMNIASGCPLFVPLSQLDSSSHAYVRDDTMYL
RVIVDTSDLN
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgcctggtttatcggtgaaactaaaaggagaggggaccgacccgaagtactgctgctcg
tcctgtggtctcctgttgaacgagccacggcagacatcctgtggacatcggtactgcaaa
tccagcgtggaagaccttactagacctgatgggggacaatgcaaggtgccatcatgtgga
caacatattaagattgaagacgttttcccggacaaggccattgagagagaaataaaaagc
attccagttctctgcaacaatgacgatgatggctgcaaatgggagggactactgaaggac
cttaaggctcacctcgatgaatgtgagtatgagaagattgcctgcattcacaagaactgc
ggggagaaaatcccaaggagggacctttccaaacatcttaatgaaaactgtgggttccgg
tctgctgcctgccagttttgtaaggagtctcatccattcaaggacatcgcgaaccaccag
gagtcgtgccccatggcccctgcccggtgtaagtggtgcggtaagaagggtctgacccgc
tcacagctgcaggaccatcaacatccgcagactggagactgtcccaacatgaaactgccg
tgtcacttcgaaccggtcgggtgtacagaaaagctggaaaggaaacaacatggcgaccac
caaaagaagaccatcacagctcatctcaacatggttctggccatgctcctccaactggca
acaaacgtggaggggctccgagatgaggacgttgaggcacgcgagaacatgcgagctgcc
attcctcgactggacaagaatctcaatgaccaaatcaccaaggtttctgagctagagagg
aaactttccagctatcagtcagaaggggcaacaggatcaggatcaagcggcttgaaggca
ctggagaatcgaattgaacaaattcgggcaaaggttgaagatcttataaagaagctcgcc
gcttgggaaccgagagttggcacgtttgaggggattgttgccgttctgaaccgtgagatc
gagaaatgtagctcccagatggaggcgtacgaacgacaacgtcgccaggacagggagatc
atcgagactctggagaggaaggtcagatctctggaaaggatcatcgctctgaaggacgtt
gccctcgcggaacaagacctccggatccagaccctagaactgaccagctatgacggcatc
ctgacatggaagatcgcagacttcacacgtaagcgtcacgacgccatcacggggaagaca
gcaagtttctactcgccatgtttcttcaccagccgtacagggtacaagatgtgcgcccgg
atctacctgaacggagacgggatggggaagggcactcatgtcagcctgttcttcgtcgtc
atgagggggcactacgatgggctgctgcgctggccttttcgtcaaaaggtgaccttcatg
ctcctggaccagaacaaccgtgaacacgtgatcgacgcgttccgtcctgacccgaccagc
tcgtccttccagcggcccaccagtgacatgaacatcgccagtggatgtccgctcttcgtg
ccgctcagtcagctggacagcagcagccacgcctatgtgagagacgacaccatgtacctc
cgtgttattgtcgacacgagtgatttaaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (30)   
   Pfam (30)   
All databases (48)   

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