KEGG   Branchiostoma floridae (Florida lancelet): 118428830
Entry
118428830         CDS       T01074                                 
Name
(RefSeq) actin, cytoplasmic
  KO
K05692  actin beta/gamma 1
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Pathway
bfo03082  ATP-dependent chromatin remodeling
bfo04145  Phagosome
bfo04814  Motor proteins
bfo04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118428830
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118428830
  09142 Cell motility
   04814 Motor proteins
    118428830
   04820 Cytoskeleton in muscle cells
    118428830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfo03021]
    118428830
   03019 Messenger RNA biogenesis [BR:bfo03019]
    118428830
   03036 Chromosome and associated proteins [BR:bfo03036]
    118428830
   03029 Mitochondrial biogenesis [BR:bfo03029]
    118428830
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:bfo04812]
    118428830
   04147 Exosome [BR:bfo04147]
    118428830
Transcription machinery [BR:bfo03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     118428830
Messenger RNA biogenesis [BR:bfo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     118428830
Chromosome and associated proteins [BR:bfo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     118428830
    NuA4 complex
     118428830
  Chromatin remodeling factors
   BAF complex
    118428830
   PBAF complex
    118428830
   GBAF(ncBAF) complex
    118428830
   SWR1 complex
    118428830
Mitochondrial biogenesis [BR:bfo03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    118428830
Cytoskeleton proteins [BR:bfo04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     118428830
Exosome [BR:bfo04147]
 Exosomal proteins
  Proteins found in most exosomes
   118428830
SSDB
Motif
Pfam: Actin DUF6581
Other DBs
NCBI-GeneID: 118428830
NCBI-ProteinID: XP_035694947
UniProt: C3YC50
Position
13:complement(7448955..7454177)
AA seq 375 aa
MEDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSTAASSSSLEKSY
ELPDGQVITIGNERFRCPESLFQPSFLGMESTGVHETTYNSIMKCDIDIRKDLYANTVLS
GGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagacgatgttgcagcgctggttgtggacaacggctccggtatgtgcaaggccggt
ttcgctggagatgacgctccccgtgctgtgttcccctccatcgtgggacggccacgccat
cagggtgtgatggttggcatgggccagaaggacagctatgtaggtgatgaggcccagagc
aagagaggtatccttacactgaagtaccccatcgagcacggtatcgtcaccaactgggac
gacatggagaagatctggcaccacaccttctacaacgagctgcgtgtcgctccagaggaa
caccccgtgctgctgactgaggccccactcaaccctaaggccaacagggaaaagatgaca
caaattatgttcgagaccttcaacagcccagccatgtacgttgccatccaagccgtgctg
tccctgtacgcatccggtcgtaccacaggtatcgtgctggactctggagatggtgtctcc
cataccgtgcccatctacgagggttacgccctgccccacgccatcctccgtctggatctg
gctggacgtgatctgacagactacctcatgaagatcctcacagagcgtggctacagcttc
acaaccactgctgagagggaaatcgtccgtgacatcaaggagaagctgtgctatgtggcc
ctggacttcgagcaggagatgtccaccgctgcctccagctccagtctggagaagagctac
gagctgcctgacggacaagtcatcaccatcggcaacgagaggttccgctgccccgagtct
ctcttccagccttcattcctcggaatggagtccactggtgttcacgagacaacctacaac
tccatcatgaagtgcgacatcgatatcaggaaggacctgtacgccaacaccgtgctgtcc
ggtggcaccaccatgttccccggtatcgccgaccgtatgcagaaggagatcaccgccctg
gcacccagcaccatgaagatcaagatcatcgctcctcccgagaggaagtactctgtctgg
atcggagggtccatcctggcctccctgtccaccttccagcagatgtggatcagcaagcag
gagtacgacgagtccggcccatccatcgtccaccgcaagtgcttctaa

  All links  
Ontology (7)   
   KEGG BRITE (7)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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