KEGG   Branchiostoma floridae (Florida lancelet): 118431865
Entry
118431865         CDS       T01074                                 
Name
(RefSeq) transportin-1-like isoform X1
  KO
K18752  transportin-1
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Pathway
bfo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118431865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bfo03019]
    118431865
   03009 Ribosome biogenesis [BR:bfo03009]
    118431865
Messenger RNA biogenesis [BR:bfo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     118431865
Ribosome biogenesis [BR:bfo03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    118431865
  Pre-60S particles
    118431865
SSDB
Motif
Pfam: HEAT_EZ HEAT HEAT_2 Arm IBN_N Vac14_Fab1_bd Cnd1 PDS5 MMS19_C CLASP_N CEP104-like_TOG Dopey_N RTP1_C1
Other DBs
NCBI-GeneID: 118431865
NCBI-ProteinID: XP_035699162
UniProt: A0A9J7MDB3
Position
15:complement(7653855..7684731)
AA seq 904 aa
MEWQPDPAGLQQILQLLKESQSPDTETQRAVQQKLESLNQYPDFNNYLIYVLTKLKTEDE
PTRSLSGLILKNNVKAHYTNFPAQVTDFVKKECLANIGDPSPLIRATIGILITTIASKGE
LQNWPELLPHLCSLLDSNDYNTCEGAFGALQKVCEDSAELLDCDALNRPLNTMIPKFLQY
FKHTSAKIRSHAIACVNQFIISRTQALMVHIDVFIENLFALANDEDPEVRKNVCRALVML
QEVRMDRLIPHMHNIVEYMLLRTQDGDETVALEACEFWLTLAEQPICKEVLSGYLDRVIP
VLVNNTRYSEIDIILLKGDVEEDEQVPDREEDIRPRFHKAKTHTPSEEQDGQDSSDLDDD
DALSDWNLRKCSAAALDVLANVFRDDLLPNLLPILKETLFHPDWEAKESGILVLGAIAEG
CMNGMVQHLPDLVPFLIKSLSEKKALVRSITCWTLSRYAHWIVQQQHELYLKPLMTELLK
RVLDTNKRVQEAACSAFATLEEEACTELVPYLGYILETLVYAFNKYQHKNLLILYDAIGT
LADSVGNHLNKAEYINMLMPPLIAKWNSLRDEDKDLFPLLECLSSVATALQSGFLPYSEP
VYQRCVNLVQQNLQQSMASLSQPDQFEPPDKDFMIVALDLLSGLAEGLNEQIEPLVSSSN
ILSLLFQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADYMPILGANLNPEFVLLPFA
ADFMPILGANLNPEFISVCNNATWAIGEISIQMGADMQPYVALVLNQLVDIINRPGTPKT
LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICSMIHVNPG
GVVQDFIFFCDAVASWVNPKEDLKEMFFRILQGFKTQVGEENWRRFSDQFPLPLKERLST
QYGV
NT seq 2715 nt   +upstreamnt  +downstreamnt
atggagtggcagcctgacccggcgggtcttcaacagattctacagcttctcaaggagtcc
cagtctccagatacggagacacagcgtgccgtacaacaaaaattagaatcgttaaaccag
tatccagacttcaataactacctgatctacgtgctgacgaagctgaaaactgaagatgag
cccacccgctccctgagtggactgatccttaagaacaacgtgaaggcacactacaccaac
tttcctgcgcaagtcaccgactttgtcaagaaggaatgtctggccaacatcggggaccca
tctccgctgatccgtgccacgatagggatcctgatcaccaccatagcatcgaagggcgag
ctgcagaactggccggagcttctgccacacctctgctccttactggactccaatgactac
aacacctgtgagggtgcatttggagctctgcagaaggtgtgcgaggactcagcagagctg
ctggactgtgacgccctgaaccgacccctcaacaccatgatccccaagttcctacagtat
ttcaaacacactagcgccaaaatcaggtcccatgcaatagcttgcgtaaaccagttcatc
attagcagaacccaggctctgatggtacacattgatgtttttattgagaacctgtttgcc
cttgcgaacgatgaggaccctgaggtgaggaagaacgtgtgccgcgccctggtgatgcta
caggaagtgcgcatggacaggttaatccctcacatgcacaacatcgtagagtatatgctg
ctgcgaacccaggacggcgatgagaccgtggcgctggaggcgtgtgagttttggctcacg
ttggcggaacagcccatctgtaaggaggtcctctctgggtatctggacagagttattcct
gttctagtcaataatacacggtattcggaaattgacatcattttgctgaagggcgacgtg
gaggaagacgaacaggtgcctgacagagaggaggacatccgtccccgcttccacaaagcc
aagactcacaccccctccgaggaacaggatggacaggacagctcagacctagatgatgat
gatgcattatctgactggaacttaagaaagtgttcagcggctgcactggacgtgttagcg
aacgtgtttcgggacgacctgttgccaaacttgttacctatcctgaaggagaccctgttc
catcctgactgggaagccaaggagtccggaattctggtgctgggtgccatcgctgaaggt
tgcatgaacggtatggtacagcacttgccagacctggtgccgttcttgataaagtctctg
tcggagaagaaagcgctggtccggtccatcacgtgctggacgctgagccgctacgcccac
tggatcgtgcagcagcagcatgagctgtacctgaagccactcatgacagaactgttgaag
agagtcctggacaccaacaagagagtacaggaggcagcttgcagtgcgtttgcgacgttg
gaggaggaggcttgtacagaactggttccctacctggggtacatattggagacactggtg
tatgccttcaataagtatcagcacaaaaacctgctcattctgtacgatgccatcggaacc
ttggcagactctgttggaaaccacctgaacaaagcggaatacatcaacatgctcatgcca
ccactaattgccaaatggaactcattgagagatgaagacaaagaccttttccccttgttg
gagtgtttatcgtcggtagccacggccctacagtctgggttcctgccatactccgagcca
gtctaccaacgctgtgtcaacctggtacagcaaaacctccagcaaagtatggcttccctg
tcccagcccgaccagttcgagccgcccgacaaggacttcatgatcgtggctctggacctg
ctgagtgggcttgcagaggggctgaacgagcagatcgaacccctggtcagcagcagcaac
atcctgtctctgctgttccagtgtatgcaggacaaaatgccagaagttcgacagagttcc
tttgccctactgggagacctaacaaaagcctgttttcagcatgtcaagccctgtattgct
gattacatgcccatccttggagcaaacctgaatccagagttcgtcttgcttccttttgca
gccgatttcatgcccatcctgggagcaaaccttaaccctgagttcatatctgtgtgcaat
aatgccacctgggctatcggagagatctccatacagatgggtgcggacatgcaaccgtat
gttgcgttagttttgaaccaattagttgatattatcaaccgtccaggcacacccaagacc
ttgctagaaaacacagccataacaattggccgtcttggttacgtatgtccgcaagaagtg
gcccctatgttacagcagtttataagaccgtggtgcacgtcactgcgaaacattcgggac
aacgaggagaaggactcagcattccgtggaatctgtagcatgatccatgtcaaccctggt
ggggtggtgcaggatttcattttcttctgtgatgcagttgcctcctgggtgaatcctaaa
gaagacctaaaagagatgttcttccggatcctgcaagggttcaagacccaggttggtgaa
gagaactggcgacgcttctcagaccagtttcccctgcccctgaaggagaggctgtccacc
cagtacggagtatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (13)   
   Pfam (13)   
All databases (29)   

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