KEGG   Bacteroides fragilis YCH46: BF0297
Entry
BF0297            CDS       T00202                                 
Name
(GenBank) DNA gyrase B subunit
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
bfr  Bacteroides fragilis YCH46
Brite
KEGG Orthology (KO) [BR:bfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bfr03032]
    BF0297
   03400 DNA repair and recombination proteins [BR:bfr03400]
    BF0297
Enzymes [BR:bfr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BF0297
DNA replication proteins [BR:bfr03032]
 Prokaryotic type
  DNA Topoisomerases
   BF0297
DNA repair and recombination proteins [BR:bfr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BF0297
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 Toprim_4
Other DBs
NCBI-ProteinID: BAD47046
UniProt: Q64ZN0
Position
complement(329193..331151)
AA seq 652 aa
MSEEQNPTNNGSYSADSIQVLEGLEAVRKRPAMYIGDISVKGLHHLVYEIVDNSIDEALA
GYCDHIEVTINEDNSITVQDNGRGIPVDFHEKEQKSALEVAMTVLHAGGKFDKGSYKVSG
GLHGVGMSCVNALSTHMTTQVFRNGKIYQQEYEIGKPLYPVKEVGIADHTGTKQQFWPDD
SIFTETIYDYKILASRLRELAYLNAGLRISLTDRRVVNEDGSFKHETFYSEEGLREFVRF
IESSREHLINDVIYLNTEKQNIPIEVAIMYNTGFSENIHSYVNNINTIEGGTHLAGFRRA
LTRTLKKYAEDSKMLEKVKVEISGDDFREGLTAVISVKVAEPQFEGQTKTKLGNNEVMGA
VDQAVGEVLNYYLEEHPKEAKAIVDKVILAATARHAARKAREMVQRKSPMSGGGLPGKLA
DCSDKDPQKCELFLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAMYHKALESEEIR
NIYTALGVTIGTEEDSKAANIDKLRYHKIIIMTDADVDGSHIDTLIMTFFFRYMPQIIQN
GYLYIATPPLYLCKKGKIEEYCWTDAQRQKFIDTYGGGSENAIHTQRYKGLGEMNAQQLW
ETTMDPENRMLKQVNIDNAAEADYIFSMLMGEDVGPRREFIEENATYANIDA
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgagcgaagaacagaatcccaccaataacgggtcttattcagcagatagtatccaagta
ttggaaggacttgaagcagttagaaaacgccctgcgatgtacattggtgacatcagcgta
aagggacttcatcacttggtatatgaaattgtcgacaactctatcgacgaagcattggcc
ggttattgcgaccatatcgaagtaactatcaacgaagacaactctatcaccgtacaggat
aatggacgtggtattccggtagatttccacgaaaaagagcagaaatctgccctcgaagtt
gccatgaccgtactgcatgccggaggtaagttcgataaaggttcgtacaaagtatccgga
ggtcttcacggtgtaggtatgtcctgtgtgaatgcattgtctacacacatgactacccag
gtattccgcaacggtaaaatctatcagcaggaatatgaaatcggtaaaccgctttatccc
gttaaagaagtaggaatagcggaccacacaggaaccaaacagcaattctggcccgatgac
agtatctttaccgaaaccatttatgattataagattctggcttcacgtttacgtgaattg
gcttatctgaatgccggtctgcgcatctcgctgacagatcgtcgcgtagtgaatgaggac
ggcagtttcaaacacgaaactttctattcggaagagggtttaagagaatttgtacgtttc
atcgaatcgtcacgcgaacacttgattaacgatgtgatttatctaaacacagagaaacaa
aacatccccatcgaggtggctatcatgtacaataccggattttcagaaaatatccattcg
tacgtcaataacattaatactatagaaggtggtacgcatctggcaggtttccgccgcgcc
ctgacccgtacactgaagaaatatgcagaagacagcaaaatgctggagaaagttaaagta
gaaatctccggcgatgacttccgtgaaggtctgacagctgtgatctctgtaaaagtagct
gaaccccaatttgaaggacagactaaaactaagttgggaaacaacgaagtaatgggtgct
gtcgatcaggcggtaggcgaagtactaaactattatctggaagaacacccgaaagaggct
aaagcaattgtagacaaagtgattttggctgctactgcacgccacgccgcccgcaaagcg
cgtgagatggtacagcgtaaatctcctatgtcaggtggcggtcttccgggtaaactggcc
gactgttcggacaaagatccgcagaagtgtgagttgttcctcgtcgagggagactctgcc
ggcggtacagctaagcaaggccgtaaccgtgcgtttcaggctattcttccactacgcggt
aagattctgaacgtagagaaagccatgtatcacaaagcgcttgaaagcgaagaaatacgc
aatatatacacggcactgggtgtcactatcggaacggaagaagacagcaaagctgccaat
atcgataagctgcgctatcataaaatcattatcatgaccgatgccgacgtcgatggatca
cacatcgacacactgatcatgactttcttcttccgctatatgccacagatcattcagaat
ggctatctgtacattgccactcccccgctctacctttgcaaaaaaggaaaaatagaagag
tattgctggacagatgcgcaacgccagaagtttatcgacacttatggtggcggttcggaa
aatgcaatccatacacagcgctacaaaggtttgggtgagatgaatgcccagcagttgtgg
gaaacgactatggatccggaaaaccgtatgctgaaacaggttaatatcgacaacgcagca
gaagccgactatatcttctccatgttgatgggtgaagacgtaggtccacgccgcgagttc
attgaagagaatgcaacgtatgcaaatatcgatgcataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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