KEGG   Bacteroides fragilis NCTC 9343: BF9343_2985
Entry
BF9343_2985       CDS       T00239                                 
Name
(GenBank) putative DNA polymerase III
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bfs  Bacteroides fragilis NCTC 9343
Pathway
bfs03030  DNA replication
bfs03430  Mismatch repair
bfs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BF9343_2985
   03430 Mismatch repair
    BF9343_2985
   03440 Homologous recombination
    BF9343_2985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bfs03032]
    BF9343_2985
   03400 DNA repair and recombination proteins [BR:bfs03400]
    BF9343_2985
Enzymes [BR:bfs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BF9343_2985
DNA replication proteins [BR:bfs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BF9343_2985
DNA repair and recombination proteins [BR:bfs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BF9343_2985
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 RuvB_N AAA_22 AAA_14 AAA_5 DNA_pol3_delta_C AAA_19 AAA_30 AAA_24 Rad17 NTPase_1 ResIII AAA_18 Mg_chelatase DNA_pol3_delta AAA_2 AAA_16 RNA_helicase nSTAND3 AAA_7 AAA_assoc_2
Other DBs
NCBI-ProteinID: CAH08766
UniProt: Q5LAV7
Position
complement(3573852..3575696)
AA seq 614 aa
MENYIVSARKYRPSTFESVVGQRALTTTLKNAIATQKLAHAYLFCGPRGVGKTTCARIFA
KTINCMNLTADGEACNECESCVAFNEQRSYNIHELDAASNNSVDDIRQLVEQVRIPPQIG
KYKVYIIDEVHMLSASAFNAFLKTLEEPPRHAIFILATTEKHKILPTILSRCQIYDFNRI
SVDDTVNHLTYVASKEGITAEPEALNVIALKADGGMRDALSIFDQVVSFTGGNITYKSVI
ENLNVLDYEYYFRLTDCFLENKVSDALLLFNDVLNKGFDGSHFITGLSSHFRDLLVSKDA
ATLQLLEVGAGIRQRYQEQAQKCALPFLYRAMKLCNDCDMNYRASKNKRLLVELTLIQVA
QLTVEGDDGSGGRGPKQAIKPIFTQPAAAQQPQVAPIASPSQSMNAATPVAPQAVSQQAG
SSPAVNVRPGGAVSPSGAMPDAVRMAQFKEEKKIPVMKKSSLGLSIKHPQKEEEQRGAGV
VHTAHMSTQQIEEDFIFNERDLNYYWQEYAGRMPIEQKAIAMRMQNMRLSLLNDTTFEVV
VDNEIIAKDFTALIPGIQAYLRGSLKNRKVTMTVRVSEATENVRAVSRVEKFQMMAQKNN
ALLQLKEEFGLELY
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggaaaactatatcgtatccgcccgtaaataccgcccttccacttttgagtcggttgtg
ggacaacgggcactgaccactacactgaaaaatgctatcgccactcagaaactggcgcat
gcttacctgttctgcggaccgcgcggagtgggtaaaacgacttgtgcacgtatctttgcc
aagaccattaactgtatgaaccttacggcagatggcgaagcctgtaatgaatgtgagtcg
tgtgtcgccttcaacgagcaacggtcgtacaatattcacgagctggatgcggcgtccaat
aactcggtagacgatatccgtcagttggtggagcaagtacgcattccgccccagattggc
aaatataaagtatatatcattgacgaggtacacatgttgtcagcttcggcattcaatgct
tttctgaaaacacttgaagagcctccccgccacgccatatttattcttgcaacaacggag
aaacataagattcttcctaccatcttgtcgcgttgtcagatttacgactttaaccgtatc
agcgtagatgatactgtgaaccatttgacttacgtagcgtctaaagaaggaatcacggcg
gagcctgaagccttgaacgtgattgcgctcaaagcggatgggggtatgcgtgacgctctc
tctatctttgatcaggtggttagtttcaccggaggaaatatcacctacaagagtgtgatt
gagaatctcaatgtattggattacgagtattacttccgtttgacagactgttttcttgag
aataaagtgagcgatgccttgttgcttttcaacgatgtgctcaacaagggattcgacgga
agtcactttattaccggactttcatctcatttccgcgacttgctggttagtaaagatgcc
gccacgcttcagttgcttgaggtaggtgccggtattcgtcaacgctatcaggaacaagcg
cagaagtgtgcgttacctttcttgtaccgggccatgaagctttgcaatgattgtgacatg
aattatcgtgctagcaaaaacaagcgtttgctggtggaactgactttgatacaagttgcg
cagcttaccgtcgagggggatgatggtagtggtgggcgtggccctaaacaagctataaaa
cccattttcacgcaacccgccgctgctcagcagcctcaggtagcacctattgcttcacca
tctcagagtatgaatgctgctacacctgttgctccgcaggctgtgtctcaacaggctggc
agttccccagctgtcaatgtacgtccgggtggagcagtttctccatcgggtgctatgccc
gatgcggtacggatggctcaatttaaagaggaaaagaagattcctgtcatgaaaaagtcc
agtcttggactttccatcaagcatccgcaaaaggaggaagaacagcggggagcgggtgtt
gtccatactgctcatatgtcgacgcagcagatcgaagaagattttatttttaacgaacgg
gatctgaattattattggcaggagtatgccggacgtatgccgatcgaacaaaaggcgata
gccatgcgtatgcagaatatgcgtttgtcattgctcaacgacacgacttttgaggtggtg
gtagataatgaaatcattgcgaaagatttcacggctctgattcccggtatacaagcttac
ttgcgtggttcgctgaagaatcgtaaggtgacaatgactgtccgcgtcagtgaagcaacc
gaaaatgtacgtgctgtcagtcgtgtggaaaagtttcagatgatggctcaaaagaataat
gcattgttacagttgaaggaagaatttgggttggaactctactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system