KEGG   Botrytis cinerea (Gray mold): BCIN_09g02810
Entry
BCIN_09g02810     CDS       T01072                                 
Symbol
Bcrpb3
Name
(RefSeq) Bcrpb3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
bfu  Botrytis cinerea (Gray mold)
Pathway
bfu03020  RNA polymerase
bfu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bfu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BCIN_09g02810 (Bcrpb3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    BCIN_09g02810 (Bcrpb3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfu03021]
    BCIN_09g02810 (Bcrpb3)
   03400 DNA repair and recombination proteins [BR:bfu03400]
    BCIN_09g02810 (Bcrpb3)
Transcription machinery [BR:bfu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     BCIN_09g02810 (Bcrpb3)
DNA repair and recombination proteins [BR:bfu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      BCIN_09g02810 (Bcrpb3)
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac
Other DBs
NCBI-GeneID: 5435046
NCBI-ProteinID: XP_001554499
UniProt: A0A384JSD1
Position
9:complement(join(1010872..1011253,1011310..1011875,1011939..1012001))
AA seq 336 aa
MDYDPMVMDQESSGPQVKITEAGSHHVDFELSNVDLSFANSLRRTVLSEVPTIAIDRVQI
EANTSVLADEFIAHRLGLIPLNSKNCDDVIYTRDCDCEGNCELCSVTLTLHARCTGDEIM
KVYARDLVVDPQRANKWVGNPVITDPDGLGPVIAKLRKGQELRMKCIALKGIAKEHAKWA
PTAAVGFEYDPHNKLKHIDLWYEHDAAKEWPKSKYADWEEPAQEGAPFDYDAVPNNFYFE
VESIGNLEPDAIIQQGIKVMQQKLAAVLQDLTEGDGQANGGGYDAPQSPDVGMNGHGWQD
PGYATPYGGGNAWGGAGGAATPYGATPYGQNGQSGW
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggattacgaccctatggtgatggaccaggagtcctcaggtccccaggtcaagatcaca
gaggctggttcacatcacgtcgacttcgaattatccaatgtggacctctcctttgcaaac
tcgctccgccgaacagttctctcagaagttccaacgatcgctatcgatcgcgtccaaata
gaagccaacacatcagttctagcagatgaattcatcgcgcatcgacttggtcttatccca
ctaaactcgaagaattgtgatgatgttatctataccagagattgcgattgcgagggaaac
tgcgaactttgcagcgttacacttactctccacgcaagatgtacgggtgatgaaatcatg
aaagtttatgctcgcgatttggtagttgatcctcaacgtgctaacaaatgggttggaaat
cctgttattactgatccagatggacttggaccagtcattgccaagttgagaaagggtcaa
gagttgcgcatgaaatgtatagccttgaagggtattgcaaaggaacatgcgaaatgggca
cctacagctgctgtcggctttgaatatgatccacacaataaattgaagcatatcgatttg
tggtatgaacatgatgctgcaaaggaatggcccaagagtaaatatgcggattgggaagag
ccagcccaagagggcgccccctttgattacgatgccgttccaaacaacttttacttcgaa
gtcgaatcaattggtaacctagagcccgatgcaatcattcagcaaggcatcaaagtcatg
caacagaaattggctgcagtccttcaggatcttactgagggagatggtcaggctaatggt
gggggatatgatgcgcctcagagtccagacgttggtatgaatggtcatggttggcaagac
ccgggctatgctacgccatatggtgggggtaatgcctggggtggtgcgggtggtgcagct
actccttatggtgctactccatatggccaaaatggtcaaagtggatggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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