KEGG   Botrytis cinerea (Gray mold): BCIN_12g03580
Entry
BCIN_12g03580     CDS       T01072                                 
Name
(RefSeq) hypothetical protein
  KO
K10610  DNA damage-binding protein 1
Organism
bfu  Botrytis cinerea (Gray mold)
Pathway
bfu03420  Nucleotide excision repair
bfu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bfu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    BCIN_12g03580
  09124 Replication and repair
   03420 Nucleotide excision repair
    BCIN_12g03580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bfu04121]
    BCIN_12g03580
   03400 DNA repair and recombination proteins [BR:bfu03400]
    BCIN_12g03580
Ubiquitin system [BR:bfu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     BCIN_12g03580
DNA repair and recombination proteins [BR:bfu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      BCIN_12g03580
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      BCIN_12g03580
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 5432773
NCBI-ProteinID: XP_024552204
Position
12:complement(join(1232775..1233128,1233189..1236213,1236284..1236378))
AA seq 1157 aa
MAYLAPIHRPSSVRLTLRLNLLDHREECLVLAKANRLEIWRATEDGLTMAYSKSIYGRIS
MLQKIQPAGSKTDHLFVGTVRAQYFTVMWNPQTHKLDTMQSFVDVSQEHMRDSESRDRCL
VDPTGRLLVMELYEGVLNLVKIVKPRGGKTDYLENPEQVRISEMKVRASAFLYTDTKQPK
LALLYQDARENVKLATYRMLDDKGQLILQFDPKKNRENDVDDLCVGAMHIIPVPKARDEA
SKRYIVRNATTAKANLGGLVVLGETKFTYLDDESKAIVEYALDEAVLWAAWEPIDERTYL
LGDDYGFLYILTILVDGATVTGLQVVKLGQVSKPTSLENLGNGVFYIASHEADNQVVQID
LESPEHGVTLLQTLPNIAPILDFTVMDMGGREGETQLNEYSSGQARLVTGSGGFEGGSLR
SVRSGVGLDDTAILAEMEGIRKVFALHSGPTLPNDTLVVSFSTETRFFKFDTQGDIEEVE
TVKNLSSTSETLLTYNLDEGCILQVTQHEVSIYGKSPGHRWQPPNGQIITAASGNQNYIL
LSSNGRTLFTLSIQQNLAEVAFQELGDDQVACIHVPQVMGDIGVVGLWKSGSVSLLDLAT
LNTIVSEDLRRADGASIPRDIALTQILPPELSGPTLFVSMEDGIVLSFNVDKSDCSLSGR
KSIVLGTQQAQLQILPRDNTTFNVFATCEHPSLIYGSEGRTVYSAVTAEDAIAVCSLNSV
AYPGSVVVATINELKLAVIDNERRTHVRTLPIGETVRRVAYSAKEKSFAIGAIKRELTKG
QEVVTTSFRLVDEVVFGELGEPYYLPPNNEIIETVVRAELPTRHGDGELVERFLVGTSFL
HEEEANVRGRLLIFGVNADRAPYMIASHNLKGSCRCIGVLDGKIVAALNKTVVMYDYEET
SSTSATLKKLATYRCSTCPIDIDITDNIIAVADIMKSIALVEYTPGADGLPDKLEEVARH
AQQVFSTSVAEVDTDTYLETDHDGNLILLKRNREGVTREDKTRMEVTCEMNLGEMVNRVK
RINVETSKDALLIPRAFLGTTEGSIYLFSLIPPQNQDLLMRLQSRLASLPSASSIRGSSD
STSPHQIELSPGNLDFNKYRSYISATRETSEPFRFVDGELIERFLDLEVEVQEHVAEGLG
VKAEDLRGMVEGLRRLH
NT seq 3474 nt   +upstreamnt  +downstreamnt
atggcttacttggcaccgatacatagaccaagtagtgtacgacttacactgcgattgaat
cttttagatcatagagaggaatgtctggtacttgcgaaagcaaaccgattggaaatatgg
agggccacagaagacggtctcacgatggcatattcgaaatctatatatggccgcatatcc
atgctgcaaaagatccaacctgcgggatctaaaactgaccatctcttcgtcgggaccgtt
cgagcacaatactttaccgtgatgtggaatcctcagacgcacaaactggataccatgcag
tcttttgtcgatgtctctcaagaacacatgcgggattcggaaagtagggataggtgtctt
gtggatccgacggggcgactattggttatggaattgtacgaaggagtgctgaatttggtg
aagattgtgaagcctaggggaggcaagacggattacttggagaacccagagcaagttagg
atttcggagatgaaggttcgggcgagtgcgtttttgtatacggatactaaacagccgaag
ttggctttgctgtatcaggatgcgagggagaatgtgaagttggcgacatatagaatgctg
gatgacaagggacagctaattttgcagtttgatccaaagaagaacagggagaatgacgtg
gatgatttgtgtgttggagctatgcatatcataccggttccgaaggcgagggatgaggcg
agcaagagatatattgtcaggaacgcaacgactgccaaggctaatttaggaggtctggtt
gtcttgggagaaacaaagtttacatatctggatgatgaaagtaaagctattgtcgaatat
gcgctggatgaggctgtattatgggctgcttgggaaccgatagatgagagaacttatcta
ctaggagatgattatggctttttgtacattttgacaatactggtcgatggtgctacagtt
actggattgcaagttgtaaaactgggacaggtatctaaacctacatctttggagaacttg
gggaatggagtgttctacattgcttcccatgaagcggacaatcaggttgttcaaatagat
ttggagagtccagaacatggtgttacgttgttacagacactaccgaatattgctccaata
cttgattttacagtcatggacatgggcgggcgagagggagagacccaattgaatgagtat
tcttcaggtcaggctcgattagtcacgggcagtggaggattcgagggaggaagtttaaga
agtgttcggagtggagttggacttgatgatactgcaatacttgccgaaatggagggtatc
cgtaaagtcttcgcgttacattctggcccaactctaccaaatgatactcttgtagtgtcg
ttttctacagagactcgattctttaagtttgatacacaaggagatattgaagaagtggag
actgttaagaatttgtcttctacatcggaaacattactaacttataaccttgatgaaggc
tgtatattacaagtcacacaacatgaggtatcaatatatggcaaatctcccggtcatcga
tggcaacctcccaacggacaaataatcacggcagcctcaggaaaccagaactacattcta
ctttcatcgaatggacgtaccttgtttactttatcaattcaacaaaatttggcagaggtc
gcatttcaggagcttggagatgatcaagtagcttgcatacatgtaccccaagtaatgggt
gatattggtgtcgttggattatggaagtcgggatcggtatctctgcttgatctcgcaact
ctcaatactatcgtatctgaggatttacgacgagctgatggtgcttctataccgagagat
attgcccttactcaaattttacccccagaactttcaggtccgacattgtttgttagtatg
gaagatggcattgtgttgagcttcaatgttgacaagtccgattgttcactgtcgggacgc
aaaagcattgtccttggaacacaacaggcgcaacttcagattttaccacgggataataca
acctttaatgtttttgcaacatgtgagcatcctagcttgatatatggttctgaaggtaga
actgtgtattcggccgtcacagctgaggacgcaatcgcagtatgttcactgaatagtgta
gcgtacccaggttcagtagttgtggctacaataaatgaactcaaactcgcagtcatcgac
aacgaaagaagaacacatgtcagaaccttaccgattggtgaaactgtaaggagggtagca
tactcagctaaagagaaatcctttgcgattggagctattaaacgtgaattgacaaaggga
caagaagttgtcacgacttctttcaggcttgtcgacgaggttgttttcggtgagctagga
gaaccatactatttaccaccaaataacgaaattatcgagactgtcgtacgagcggagctt
ccaacaagacatggcgatggcgaattagtcgaacgcttccttgtcggtacaagtttcctc
cacgaggaagaagcgaatgttcgcggtcgtcttcttattttcggtgtcaatgcagataga
gctccatatatgatcgcttctcacaatctcaaaggttcttgtcgatgcattggtgtactc
gatggtaaaatcgtagcggcactaaataaaacagtcgtaatgtacgactacgaggaaact
tcgagtacaagcgccacgcttaaaaaactagcaacatatcgatgttcaacatgtccgatc
gatattgatattacagataatataatagcagtagcggatattatgaaatcgattgcgctg
gtcgaatatacacctggagccgatggtcttccagataaacttgaggaggtcgcaaggcat
gcacaacaagtcttctcaaccagtgtcgcagaggtagatacagatacctatctggaaaca
gatcatgatggcaatttaatattattgaagaggaatagagagggtgtcacgagagaagat
aaaactagaatggaagttacttgtgagatgaaccttggagagatggtcaatagggttaag
aggatcaatgtggaaacatcgaaagatgctctattgatcccgagagcctttctcggcaca
accgaaggatcaatctacctcttctctctcatccccccacaaaaccaagatctattaatg
cgtctccaatcccgtctagcatctcttccttccgcctcctccatcagaggatcctcggac
tctacatctcctcaccaaatcgaactctcgcccggtaatctcgatttcaataaataccga
tcctacatatccgccacgagggaaacaagcgaacccttcagatttgtagacggggaatta
atagaaagatttttggatttggaggttgaggtgcaggaacatgtggccgaggggttgggt
gtcaaagccgaggatttaagaggtatggtggagggattgaggaggttgcactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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