KEGG   Paraburkholderia atlantica CCGE1002: BC1002_0234
Entry
BC1002_0234       CDS       T01217                                 
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
bge  Paraburkholderia atlantica CCGE1002
Pathway
bge00550  Peptidoglycan biosynthesis
bge01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bge00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BC1002_0234
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:bge01002]
    BC1002_0234
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:bge01011]
    BC1002_0234
Enzymes [BR:bge01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     BC1002_0234
Peptidases and inhibitors [BR:bge01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   BC1002_0234
Peptidoglycan biosynthesis and degradation proteins [BR:bge01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   BC1002_0234
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 Beta-lactamase Peptidase_S13
Other DBs
NCBI-ProteinID: ADG14341
UniProt: D5WAN8
Position
1:260219..261448
AA seq 409 aa
MRFSSSGRTSFPSVASFIPTSLNRAIAVGLVLPATLVASTAFAQVPPPGVNARSWVLVDA
TSNQVLASANADERVEPASLTKLMTAYLVFEALDTKKITMDQSIEPSEAVRRVRNDESRM
FIEALKPVTVHDLVYGMIVQSGNDAAIALAELVGGSEAQFVDMMNKEAQKLGMKNTHFAD
VNGMPDPQHYTTAGDLAILSARLIRDYPDYYNIFSVKEFTYNKIKQPNRNRLLWIDPTVD
GLKTGHTQAAGYCLIASAKRPLPGTTDASRRLVSVMMGETKEHDRVQDSLKMLNYGYTAY
DTTRLYKANQVVATPRVYKGSQDSVQVGVKSDQYITLPKGAGDKAKPQIELNDPLIAPIA
NGQQIGTAKLVADGKVLAQFPVVALQPVPQAGVVGRVWDSLMLMFNKKK
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgcgtttctcctcctctggccgcacgtccttcccgtcagtcgcttctttcattcccact
tcgctcaatcgtgccatcgccgttggcctcgtgctgccggccaccctggtcgcgagcacc
gcgttcgcgcaggtgccgccgccgggcgtcaacgcgcgctcgtgggtgctcgtcgacgcg
accagcaaccaggtgctcgcgtccgccaatgccgacgaacgcgtcgagccggcatcgctg
accaagctgatgaccgcgtatctggtgttcgaggcgctcgacacgaagaagatcacgatg
gatcagagcatcgagccgagcgaagccgtgcggcgcgtgcgcaacgacgaatcgcgcatg
ttcatcgaggcgctcaagccggtgaccgtgcacgacctcgtgtacggcatgatcgtgcag
tcgggcaacgacgcggcgatcgcgctcgccgaactggtgggcgggagcgaggcgcagttc
gtcgacatgatgaacaaggaagcgcagaagctcggcatgaagaacacgcatttcgccgac
gtgaacggcatgcccgacccgcagcactacacgaccgcgggcgatctcgcgatcctgtcg
gcgcgcctgatccgcgactatccggattactacaacatcttctcggtcaaggaattcacg
tacaacaagatcaagcagccgaaccgcaaccgtctgctgtggatcgatccgaccgtcgac
ggtctgaagaccggccacacgcaagcggccggctactgcctgatcgcgagcgcgaagcgt
ccgctgccgggcacgaccgacgcgtcgcgccgtctcgtctcggtgatgatgggcgagacc
aaggagcacgatcgcgtgcaggacagcctgaagatgctgaactacggctacaccgcgtac
gacacgacgcgcctctacaaggcgaaccaggtcgtggccacgccgcgcgtctacaagggt
tcgcaggacagcgtgcaggtcggcgtgaagagcgaccagtacatcacgctgccgaagggt
gccggcgacaaggcgaagccgcagatcgaactgaacgatccgctgatcgcgccgatcgcg
aacggccagcagatcggtaccgccaagctcgtcgccgacggcaaggtgctcgcgcagttc
ccggtcgtcgcgctgcagccggtgccgcaagccggtgtagtcggccgcgtgtgggattcg
ctgatgctgatgttcaacaagaagaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system