KEGG   Paraburkholderia atlantica CCGE1002: BC1002_0530
Entry
BC1002_0530       CDS       T01217                                 
Name
(GenBank) Glycine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
bge  Paraburkholderia atlantica CCGE1002
Pathway
bge00260  Glycine, serine and threonine metabolism
bge00460  Cyanoamino acid metabolism
bge00630  Glyoxylate and dicarboxylate metabolism
bge00670  One carbon pool by folate
bge00680  Methane metabolism
bge01100  Metabolic pathways
bge01110  Biosynthesis of secondary metabolites
bge01120  Microbial metabolism in diverse environments
bge01200  Carbon metabolism
bge01230  Biosynthesis of amino acids
bge01240  Biosynthesis of cofactors
Module
bge_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:bge00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    BC1002_0530
  09102 Energy metabolism
   00680 Methane metabolism
    BC1002_0530
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BC1002_0530
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    BC1002_0530
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    BC1002_0530
Enzymes [BR:bge01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     BC1002_0530
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Aminotran_5 Cys_Met_Meta_PP OKR_DC_1
Other DBs
NCBI-ProteinID: ADG14631
UniProt: D5WC76
Position
1:587818..589065
AA seq 415 aa
MFDRAQSTIANVDPELWKVIEQENRRQEEHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVAEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEAEDIDYDAAEKLAQEHKPKLIVAGASAFAL
RIDFERLSKIAKSVGAYFMVDMAHYAGLVAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKPINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKAYQQQVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKKITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFGVKEAEQVGNLIADVLDNPEDAATIERVRAQVAELTQRFPVYG
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgtttgacagagcccaaagcaccatcgccaacgtcgatcctgaactctggaaggttatc
gagcaggaaaaccggcgtcaggaagagcacatcgaactgatcgcgtcggaaaactacacg
agcccggccgtgatggccgcgcaaggctctcaactcacgaacaagtacgccgaaggctat
ccgggcaagcgctattacggcggctgcgaatacgtcgacgtcgccgagcagctggcgatc
gaccgcgtgaagcagctgttcggcgccgaagccgcgaacgtgcagccgaactcgggctcg
caggcgaaccagggcgtgttcttcgcgatgctcaagccgggcgacacgatcatgggcatg
agcctcgcgcacggcggccacctcacgcacggctcgccggtcaacatgtcgggcaagtgg
ttcaacgtggtcagctacggtctgaacgaagccgaagacatcgactacgacgcggctgaa
aagctcgcgcaagaacacaagccgaagctgatcgtggcgggcgcatccgcgtttgcgctg
cgcatcgacttcgaacgcctgtcgaagatcgcgaagtcggttggcgcctacttcatggtc
gacatggcgcactacgcgggcctcgtcgccgcgggcgtttatccgaacccggtgccgcac
gccgatttcgtcaccaccaccacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgagtacgagaagccgatcaactcggcgattttcccgggcatccagggc
ggtccgctgatgcacgtgattgccgcgaaggccgtcgcgttcaaggaagcgttgtcgccg
gaattcaaggcgtatcagcagcaggtcgtcgagaacgcgcgcgtgctcgctgaaacgctg
gtcaagcgcggtctgcgcatcgtgtcgggccgcacggaaagccacgtgatgctggtcgac
ctgcgtgcgaagaagatcaccggcaaggctgcggaagcggcgctcggcgcggcgcacatc
acggtcaacaagaacgcgatcccgaacgatccggaaaagccgttcgtgacctcgggcatc
cgtctgggttcgccggcgatgaccacgcgcggcttcggcgtgaaggaagccgagcaagtc
ggcaacctgatcgccgacgtgctggacaacccggaagacgccgcgacgatcgagcgcgtg
cgcgcgcaagtcgccgagctgacccagcgcttcccggtttacggctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (38)   

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