KEGG   Paraburkholderia atlantica CCGE1002: BC1002_1139
Entry
BC1002_1139       CDS       T01217                                 
Name
(GenBank) transcriptional regulator, IclR family
  KO
K20329  IclR family transcriptional regulator, positive regulator for flagellar biogenesis
Organism
bge  Paraburkholderia atlantica CCGE1002
Pathway
bge02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bge00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BC1002_1139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bge03000]
    BC1002_1139
Transcription factors [BR:bge03000]
 Prokaryotic type
  Helix-turn-helix
   IclR family
    BC1002_1139
SSDB
Motif
Pfam: HTH_IclR IclR MarR_2 MarR HTH_24 HTH_Crp_2 HTH_36 TrmB Xre-like-HTH GGDEF_2 HTH_5 Rrf2 HTH_AsnC-type HTH_3 HTH_23 RP-C HTH_20 HTH_37
Other DBs
NCBI-ProteinID: ADG15225
UniProt: D5W6T0
Position
1:complement(1270498..1271343)
AA seq 281 aa
MNRSTPSQTVTAKVPASKDRDGPGDEVTALARGLTVLRAVAAAHAPLSNRELAELTGIPK
PTVSRITATLVGAGFLLRLPESERFVLTSSVLELSNGFLRNFDIRSRARPFLIELAERTA
LSVHLAVRDRYDMVVIDAIRPRSAVLVSRLEIGSRMSLTRTAVGRAYLAALAQPDRDRLL
IGLQTAEGDDWGYIGSRLASAIQDTLERGFAIATGEWYNGLNAIALGFVGPSGERYAVNC
GGSADQCPRDWLISDAAPALLECIDKIVLEIGGTPGRRLDE
NT seq 846 nt   +upstreamnt  +downstreamnt
atgaaccgatccacacccagccagaccgtcaccgccaaggtccccgccagcaaagaccga
gacggcccgggcgatgaagtcaccgcgctcgcgcgcgggctgaccgtattgcgtgccgtc
gccgccgcgcacgcaccactcagcaatcgcgaactcgccgaattgaccgggattccgaag
cccaccgtgtcgcgcatcaccgcgacgctcgtcggcgccggtttcctgctgcgactgccc
gaaagcgagcgcttcgtgctgacctcgtcggtgctcgaactgagcaacggctttctgcgc
aacttcgacatccgctcgcgcgcgcggccattcctgatcgaactcgcggaacgcaccgcg
ttgtccgtgcatctggcggtgcgcgaccgctacgacatggtcgtcatcgacgcgatccgg
ccgcgttcggcggtgctcgtatcgcgactcgagatcggctcgcgcatgagcttgacgcgc
accgcggtcggccgggcgtatctcgccgcgctcgcgcaaccggatcgcgaccgtctgctc
atcggtctgcagacggccgaaggcgacgattggggctacatcggcagccgtctcgccagc
gcgatccaggacacgctcgagcgcggcttcgccattgcgaccggcgagtggtacaacggg
ctgaacgcgatcgcgctcggcttcgtcgggccgtcgggtgagcgctacgcggtcaattgc
ggcggctcggccgatcagtgtccgcgcgactggctgatctcggacgccgcacccgcgctg
ctcgaatgcatcgacaagatcgtgctggagatcggcggcacgccggggcgccggctcgac
gaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (26)   

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