KEGG   Burkholderia sp. CCGE1003: BC1003_4949
Entry
BC1003_4949       CDS       T01314                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
bgf  Burkholderia sp. CCGE1003
Pathway
bgf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bgf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BC1003_4949
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgf03019]
    BC1003_4949
   03110 Chaperones and folding catalysts [BR:bgf03110]
    BC1003_4949
   03029 Mitochondrial biogenesis [BR:bgf03029]
    BC1003_4949
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bgf04147]
    BC1003_4949
Enzymes [BR:bgf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     BC1003_4949
Messenger RNA biogenesis [BR:bgf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BC1003_4949
Chaperones and folding catalysts [BR:bgf03110]
 Heat shock proteins
  HSP60 / Chaperonin
   BC1003_4949
Mitochondrial biogenesis [BR:bgf03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    BC1003_4949
Exosome [BR:bgf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   BC1003_4949
  Exosomal proteins of other body fluids (saliva and urine)
   BC1003_4949
  Exosomal proteins of breast cancer cells
   BC1003_4949
  Exosomal proteins of colorectal cancer cells
   BC1003_4949
  Exosomal proteins of bladder cancer cells
   BC1003_4949
SSDB
Motif
Pfam: Cpn60_TCP1 EAD9 DNA_ligase_OB
Other DBs
NCBI-ProteinID: ADN60872
UniProt: E1TJ56
Position
2:complement(1646883..1648505)
AA seq 540 aa
MSAKDVRFHDSARSRIVKGVNVLADAVKVTLGPKGRNVVIERSFGAPVITKDGVSVAKEI
ELKDRFENMGAQVVKQVASKTADVAGDGTTTATVLAQSIVQEGMKHVAAGMNPMDLKRGI
DKAVAAVLDELMRTSKRISTSKEIAQVASISANADEAIGKIIADAMEKVGKEGVITVEDG
KSLDNELDVVEGMQFDRGYLSPYFINNPDRQAAYLDDPLILLYDKKISAVRDLLPILEAS
AKAGKPLFIIAEDVEGEALATLVVNSMRGVLKVAAVKAPGFGDRRKAMLEDIAVLTGATV
ISEETGKQLEKATLEDLGSAKRVEVRKDDTIIIDGAGQQQRIEARVKAIRAQIEETTSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL
RARSAIANLKGANADQDAGIRIVLRALEAPLRVIASNAGDEPSVVIAKVLEGKGNFGYDA
STGQYGDLVEAGVVDPTKVTRTALQNAASVAGLILTTDATVAEAPKEEKPAAAAAPEMEY
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgagtgcgaaagatgtcaggttccacgacagcgcccgtagccggatcgtcaagggcgtg
aacgtgctggccgatgcagtgaaagtgacgctcggcccgaaaggccgcaacgtggtgatc
gagcgcagcttcggcgcgccggtcatcaccaaggacggcgtgtcggtggcgaaagagatc
gagctgaaagaccgtttcgagaacatgggcgcgcaggtcgtcaagcaggtggcctcgaaa
acggccgacgtggccggcgacggcaccaccacggccacggtgctcgcgcaatccatcgtg
caggaaggcatgaaacacgtcgccgcgggcatgaacccgatggatctgaagcgcggcatc
gacaaggcggtcgcggccgtgctggacgaactgatgcggacttccaagcgcatctcgacc
agcaaggaaattgcccaggtcgcgtcgatctcggcgaatgccgacgaagcaatcggcaag
atcattgcggacgcaatggaaaaggtcggcaaggaaggcgtgattaccgtggaagacggc
aagtcgctcgacaacgaactcgacgtcgtggagggcatgcagttcgaccgcggctatctg
agcccgtacttcatcaacaatcccgacaggcaggctgcgtatctcgacgatccgctgatc
ctgctgtacgacaagaagatttccgcagtccgcgacctgctaccaattctcgaggcgtcg
gccaaggcgggcaagccgctcttcatcatcgcggaagacgtggagggcgaggcgcttgca
acgctcgtcgtcaattccatgcgcggcgtcctcaaggtggctgcagtgaaggcgcccggt
tttggcgaccgccgcaaggcgatgctcgaagacattgcggtgctcacgggcgcaaccgtc
atttccgaggaaaccggcaagcagctcgagaaagcgacgctcgaagacctcggcagcgcc
aagcgcgtggaagtgcgcaaggacgacacgatcatcatcgacggcgccgggcagcagcaa
cgcatcgaggcgcgcgtgaaagccattcgtgcgcagatcgaggaaaccaccagcgactac
gaccgcgaaaagctgcaggaacgcgtcgcgaagctcgcgggcggcgtcgccgtaatcaag
gtgggcgcggcgacggaagtcgagatgaaggaaaagaaagaccgcgtggacgatgcattg
cacgcgacccgtgccgcagtggaagaaggcattgtgccgggcggcggcgtggcactgctg
cgcgcccgctcggccattgctaacctgaagggcgccaacgcagaccaggacgcgggcatc
cgcatcgtcctgcgcgcgctggaagcgccgttgcgcgtgattgcttcgaacgcgggcgac
gagccctcggtcgtcatcgcgaaagtgctcgaaggcaagggcaatttcggttacgacgcg
tcgacgggacagtacggcgatctggtcgaagcaggcgttgtcgatccgaccaaagtgacg
cgcacggcgctgcagaacgcggcgtcggttgcgggcctcattctcacgacggacgcgacc
gtcgcggaagcgccgaaggaagaaaagcccgccgccgcggcagcgccggagatggagtac
taa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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