KEGG   Blastomyces gilchristii: BDBG_01515
Entry
BDBG_01515        CDS       T06540                                 
Name
(RefSeq) translation initiation factor 4A
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
bgh  Blastomyces gilchristii
Pathway
bgh03013  Nucleocytoplasmic transport
bgh03015  mRNA surveillance pathway
bgh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bgh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BDBG_01515
  09122 Translation
   03013 Nucleocytoplasmic transport
    BDBG_01515
   03015 mRNA surveillance pathway
    BDBG_01515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bgh03019]
    BDBG_01515
   03041 Spliceosome [BR:bgh03041]
    BDBG_01515
   03009 Ribosome biogenesis [BR:bgh03009]
    BDBG_01515
   03012 Translation factors [BR:bgh03012]
    BDBG_01515
Enzymes [BR:bgh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BDBG_01515
Messenger RNA biogenesis [BR:bgh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     BDBG_01515
   mRNA cycle factors
    Stress granule specific factors
     BDBG_01515
Spliceosome [BR:bgh03041]
 Complex C
  Other components
   EJC/TREX
    BDBG_01515
Ribosome biogenesis [BR:bgh03009]
 Eukaryotic type
  90S particles
   Helicases
    BDBG_01515
Translation factors [BR:bgh03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    BDBG_01515
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30 AAA_22 TniB COG4_N Flavi_DEAD
Other DBs
NCBI-GeneID: 8507562
NCBI-ProteinID: XP_002628607
UniProt: A0A179UAM2
Position
Unknown
AA seq 399 aa
MADGIDRTAEERMEFTTSKEVTVAPTFEDMHLKENLLRGIYAYGYESPSAVQSRAIVQIC
KGRDTIAQAQSGTGKTATFSISILQVIDTVLRETQALVLSPTRELATQIQSVVMALGDYM
NVQCHACIGGTNVGEDIRKLDHGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELL
NRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEGLKQ
YFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQ
KERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGR
KGVAINFVTSEDVRILRDIELYYSTQIDEMPMNVADLLT
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggcggacggaattgatagaacggcggaggagaggatggagttcacgacctcaaaagag
gtgactgtcgcgccaacctttgaggacatgcacttgaaggaaaacctcttgcggggtatc
tatgcatacggatacgaatcgccatcagccgtacagtctcgcgcaatcgtccaaatctgc
aagggccgcgataccatcgcgcaggcacagtcaggcaccggtaaaactgcgacattctca
atcagcattctacaagttatcgatacagttctgagggaaactcaagctcttgtcttatcg
ccaacgcgagagcttgcaacccaaattcagtccgtggttatggccctgggtgactacatg
aatgtacaatgccacgcgtgtatcggtggcaccaacgttggtgaggatatacggaagctg
gatcatggtcagcatgtggtttcgggtacccccggccgtgttgctgatatgatccgccgt
cgccacctccgcacacgtcatatcaaaatgctagtacttgacgaagccgacgaactcctc
aaccgcggattccgtgaacagatctatgatgtttaccgttaccttcctcctgccacgcaa
gttgtggtcgtttccgcaaccctcccctacgacgttcttgacatgaccaccaaattcatg
actgacccagtgcgtattctggtaaagcgtgacgagttgacactagaaggactcaaacaa
tacttcattgcggtggagaaagaagaatggaaatttgataccctttgcgacctctacgat
acccttacgatcacccaggccgttattttctgcaacacgcgacgcaaggtagactggctt
acggataaaatgcgtgaagccaactttaccgtctccagtatgcatggcgaaatgccccaa
aaggaacgtgatagtattatgcaggacttccgacaaggaaactcccgtgttcttatctcc
acggacgtctgggctcgtggtatcgatgtgcagcaggtgtctctagtcatcaattatgac
ctccctagcaatcgtgagaactacatccacagaattggtcgaagtggccgcttcggacgg
aagggtgttgctatcaacttcgtcaccagtgaggacgtcagaatcctaagagatatcgaa
ttgtactactctacccagatcgatgagatgccaatgaatgttgccgaccttctcacgtaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

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