KEGG   Blastomyces gilchristii: BDBG_07849
Entry
BDBG_07849        CDS       T06540                                 
Name
(RefSeq) transcription initiation factor TFIIH subunit 2
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
bgh  Blastomyces gilchristii
Pathway
bgh03022  Basal transcription factors
bgh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bgh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    BDBG_07849
  09124 Replication and repair
   03420 Nucleotide excision repair
    BDBG_07849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bgh03021]
    BDBG_07849
   03400 DNA repair and recombination proteins [BR:bgh03400]
    BDBG_07849
Transcription machinery [BR:bgh03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     BDBG_07849
DNA repair and recombination proteins [BR:bgh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     BDBG_07849
SSDB
Motif
Pfam: Ssl1 VWA_2 Ribosomal_60s
Other DBs
NCBI-GeneID: 8502090
NCBI-ProteinID: XP_031580420
Position
Unknown
AA seq 507 aa
MSDSDDEYIAHASDHDLDEILEDDDDVDDDIDSGPAASSASGPRRRRAAAGSSAAATAAA
QSSRDAKKKKKGRGGAEWEVSRTWESLVESADGTISATVEGLLEAGKRKRLLRDTTPLQR
GIIRHLILVLDLSSAMAEKDLRPTRYLLTLRYAQEFVLEFFEQNPISQLGVLGMRDGLAV
RISDMSGNPTDHILAIQSLRPKDPKGMPSLQNTLEMARGALFRTPTHGTREVFIIFGALL
SSDPGDIHKTINTLVADKIRVSIIGLAAQVAICRDICARTNNGDDSGYGVALNEQHFREL
FMNVTTPPATTVAPTPTTTKEETKTSQTTTSSLLMMGFPSRTLSPTTTPTLCACHSKPSR
TGYLCSRCGAKVCTLPTSCPCGGLPWFLSPPRPLLPSPLSAVELGRGVRGPRCEEKECQL
FCVCGWVSAGRKAIFRGGARGAERSREKGKGRRSRGHLGLALVGAMSVPFASVIFALIAM
CLRMRLCIIVPGVRVGLCSNCSSSSSS
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgtccgattcagacgatgaatacatcgcccacgcctcagatcacgatctggacgagatc
ttagaagacgacgacgatgttgacgatgacatagactccggtcccgctgcctcctccgcc
tccgggccccggcgccgtcgagcggccgcaggaagctcagcagctgcaacagcagcagcg
caatcgtcgcgagatgctaagaagaagaaaaagggccgtggaggcgccgagtgggaggtg
tccaggacctgggagtcgctcgttgaaagcgcggatggcaccatcagcgcgacagtagag
ggtctgctggaggccgggaagaggaagagactactccgcgataccacccccctccaacgc
ggcatcattagacatctcatcctcgtcctcgacctctcctctgccatggccgaaaaggac
ctccgcccaacccgctatctcctaaccctccgctacgcccaggagtttgtcctcgagttc
ttcgaacagaaccccatctcccagctcggcgtgctaggcatgcgcgacggtctggccgtg
cgcatcagcgatatgagcgggaaccccacagatcatatcctagctatccagtccctccgc
ccaaaggaccccaagggcatgccatctctgcagaataccttagagatggcccgtggtgcg
cttttccgtacaccaacacacggcacccgcgaagtgttcataatcttcggcgccctcctc
tcctccgacccaggtgacatccacaaaaccataaacaccctggtcgccgacaaaatccgc
gtctccatcatcggcctcgccgcccaagtcgctatctgccgcgacatctgcgcccgcaca
aacaacggcgacgacagcggctacggcgtcgccctcaatgagcagcatttccgcgaacta
ttcatgaacgtcacaaccccacccgccacaaccgtcgctcccacaccaacaacaacaaaa
gaagaaacaaaaacgtcacaaacaacaacaagctccctcctgatgatgggcttcccctcc
cgaaccctcagcccaaccaccaccccaactctatgcgcctgccactccaaaccctcgcgc
accggctacctctgctcccgctgcggcgcaaaagtctgcaccctccccacctcctgcccc
tgcgggggcctcccgtggttcctctcaccacctcgcccgctccttccatcacctctttcc
gctgttgaactgggtcgaggtgtccggggcccccgctgcgaggaaaaggagtgccagctg
ttttgcgtgtgcggttgggtttccgcaggtcgtaaagcaattttccgggggggagcaaga
ggggccgagaggagcagggagaaggggaaggggagacggtcaaggggccatctgggatta
gcgttagtgggcgctatgagtgtcccgtttgcgagtgtcatttttgcattgattgcgatg
tgtttgcgcatgaggttgtgcataattgtcccgggtgtcagagtggggttgtgcagcaac
tgcagcagcagcagcagcagttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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